RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PARM1Q6UWI2 310 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF283Q8N7M2 679 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 OR10G4Q8NGN3 311 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 ST8SIA1Q92185 356 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 SDK1Q7Z5N4 2213 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 MSTNO14793 375 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 DBHP09172 617 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 AKT2P31751 481 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 HYAL1Q12794 435 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 USF2Q15853 346 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 RNASEH2CQ8TDP1 164 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 NDUFAF3Q9BU61 184 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 HIPK2Q9H2X6 1198 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 C11orf1Q9H5F2 150 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 PNRC2Q9NPJ4 139 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 NXT1Q9UKK6 140 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 FAM24AA6NFZ4 105 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 RER1O15258 196 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 C4orf17Q53FE4 359 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 PHLDA2Q53GA4 152 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 SLC22A18ASQ8N1D0 253 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 OR13H1Q8NG92 308 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 OR5L1Q8NGL2 311 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 SNX22Q96L94 193 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 TMEM68Q96MH6 324 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 SYT3Q9BQG1 590 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 NUDT22Q9BRQ3 303 aa16.21■□□□□ 0.19
SFSWAP-207ENST00000538548 MYO7BQ6PIF6 2116 aa16.21■□□□□ 0.18
SFSWAP-207ENST00000538548 A0A1W2PNV4 684 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 FCGR2AP12318 317 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 CDAP32320 146 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 CLRN1P58418 232 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 OR8G1Q15617 311 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 BEND2Q8NDZ0 799 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 DDIT4LQ96D03 193 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 Q96M66 194 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 WDFY4Q6ZS81 3184 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 FRYLO94915 3013 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 IGSF23A1L1A6 192 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 ZNF732B4DXR9 585 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 CLDN34H7C241 214 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 HBE1P02100 147 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 GLI4P10075 376 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 FXYD4P59646 89 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 RPL23AP62750 156 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 PNRC1Q12796 327 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 TMEM183AQ8IXX5 376 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 TMEM171Q8WVE6 324 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 HAS2Q92819 552 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 GNPNAT1Q96EK6 184 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 LIN37Q96GY3 246 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 ALKBH4Q9NXW9 302 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 B3GAT1Q9P2W7 334 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 DKKL1Q9UK85 242 aa16.2■□□□□ 0.18
SFSWAP-207ENST00000538548 DMDP11532 3685 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 LIPT2A6NK58 231 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 PGA4P0DJD7 388 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 PGA5P0DJD9 388 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 GZMBP10144 247 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 NUTF2P61970 127 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 H3F3AP84243 136 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 NOXO1Q8NFA2 376 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 OR5L2Q8NGL0 311 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 ANGPTL4Q9BY76 406 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 MRPL37Q9BZE1 423 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 COPS7AQ9UBW8 275 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 COL5A1P20908 1838 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 SEC16AO15027 2179 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 TRBV24-1A0A075B6N3 115 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 A0A1B0GWJ7 208 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 ANKUB1A6NFN9 424 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 CDS2O95674 445 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 DTYMKP23919 212 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 GRB2P62993 217 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 TLE4Q04727 773 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 MFAP5Q13361 173 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 TAF9Q16594 264 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 ACTR3CQ9C0K3 210 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 PLEKHF2Q9H8W4 249 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 B3GALT1Q9Y5Z6 326 aa16.19■□□□□ 0.18
SFSWAP-207ENST00000538548 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 E9PLN8 166 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 PHF1O43189 567 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 SEMA4FO95754 770 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 IGHG1P01857 330 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 PGA3P0DJD8 388 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 CD200P41217 278 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 RRADP55042 308 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 ZNF664Q8N3J9 261 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 SLC35G3Q8N808 338 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 GPR87Q9BY21 358 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 SLC7A11Q9UPY5 501 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 A0A1B0GU03 582 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 ZNF205O95201 554 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 CYB5R3P00387 301 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 IGLV3-1P01715 115 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 FOLR1P15328 257 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 FUT3P21217 361 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 OPRM1P35372 400 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms