RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 A0A087WZY1 265 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
CPSF7-218ENST00000537641 MTCP1P56278 107 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 SP6Q3SY56 376 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 GUSBP11Q6P575 273 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 CLEC9AQ6UXN8 241 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 LHFPL2Q6ZUX7 228 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.56□□□□□ -0.72
CPSF7-218ENST00000537641 FAM185AQ8N0U4 392 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 HSD17B11Q8NBQ5 300 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 OR10G3Q8NGC4 313 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 MUCL1Q96DR8 90 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 OR6C1Q96RD1 312 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 SPIN2AQ99865 258 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 SPIN2BQ9BPZ2 258 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 WDR77Q9BQA1 342 aaPredicted RBP10.56□□□□□ -0.72
CPSF7-218ENST00000537641 FAAP24Q9BTP7 215 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 GPR173Q9NS66 373 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 KIAA1456Q9P272 454 aa10.56□□□□□ -0.72
CPSF7-218ENST00000537641 ASCC3Q8N3C0 2202 aaKnown RBP10.56□□□□□ -0.72
CPSF7-218ENST00000537641 CCDC163A0A0D9SF12 145 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 LY6G6EA0A0G2JKS1 128 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 SCRG1O75711 98 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 ONECUT2O95948 504 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 HOXA6P31267 233 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 FHITP49789 147 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OR2B8PP59922 312 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 TMEM176BQ3YBM2 270 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 FAM69BQ5VUD6 431 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 UBALD2Q8IYN6 164 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OR52M1Q8NGK5 317 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OR14L1PQ8NHC6 308 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 INTS12Q96CB8 462 aaKnown RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 TOLLIPQ9H0E2 274 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 BCO1Q9HAY6 547 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 MYOTQ9UBF9 498 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 NXT1Q9UKK6 140 aaKnown RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 RARRES3Q9UL19 164 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 PTRH2Q9Y3E5 179 aaKnown RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 U3KQA8 63 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 TRIOBPQ9H2D6 2365 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 RALGAPA1Q6GYQ0 2036 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 IGHV5-10-1A0A0J9YXX1 117 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 A0A1W2PQM1 296 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 RBFOX3A6NFN3 312 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF729A6NN14 1252 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 DHHO43323 396 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 C1QL1O75973 258 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 DKK1O94907 266 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 VAMP5O95183 116 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 TIAF1O95411 115 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OPN1LWP04000 364 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 FOXL2P58012 376 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 FXYD4P59646 89 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 HERV-K104P61576 105 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 CCL7P80098 99 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 NHLH2Q02577 135 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 KIAA0141Q14154 515 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 RSPO1Q2MKA7 263 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 PHLDA2Q53GA4 152 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 DMRTC1Q5HYR2 192 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 SLC22A25Q6T423 547 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 CPEB2Q7Z5Q1 589 aaKnown RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 PPP1R3BQ86XI6 285 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 DTX1Q86Y01 620 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OR2C3Q8N628 320 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 OR5L1Q8NGL2 311 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 SAP25Q8TEE9 199 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 EDARADDQ8WWZ3 215 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 SPACA9Q96E40 222 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-218ENST00000537641 POM121Q96HA1 1249 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 SLC25A31Q9H0C2 315 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 SIRT7Q9NRC8 400 aa10.55□□□□□ -0.72
CPSF7-218ENST00000537641 CCDC187A0A096LP49 1063 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 DUXBA0A1W2PPF3 345 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 CXorf65A6NEN9 183 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 PHF1O43189 567 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-218ENST00000537641 HSPA12AO43301 675 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
CPSF7-218ENST00000537641 OPRM1P35372 400 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 H3F3AP84243 136 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 RAB35Q15286 201 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 TAF9Q16594 264 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 PHYHD1Q5SRE7 291 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 SPSB3Q6PJ21 355 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 OR2G3Q8NGZ4 309 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 SGK3Q96BR1 496 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 OPA3Q9H6K4 179 aa10.54□□□□□ -0.72
CPSF7-218ENST00000537641 C19orf25Q9UFG5 118 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-218ENST00000537641 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
CPSF7-218ENST00000537641 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
CPSF7-218ENST00000537641 FAM230AA0A1W2PPH8 454 aa10.53□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF732B4DXR9 585 aa10.53□□□□□ -0.72
CPSF7-218ENST00000537641 HBE1P02100 147 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms