RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RTTNQ86VV8 2226 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 TRAV17A0A0B4J275 112 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 A0A1B0GW55 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 PET100P0DJ07 73 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 LUMP51884 338 aaPredicted RBP13.46□□□□□ -0.26
MKS1-204ENST00000537529 PDCD1Q15116 288 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 TBC1D28Q2M2D7 210 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 MYO7BQ6PIF6 2116 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 POC1AQ8NBT0 407 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 OR5P3Q8WZ94 311 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 RBPMSQ93062 196 aaKnown RBP13.46□□□□□ -0.26
MKS1-204ENST00000537529 PIK3IP1Q96FE7 263 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 CXorf58Q96LI9 332 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 SLC25A32Q9H2D1 315 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 DUX4Q9UBX2 424 aa13.46□□□□□ -0.26
MKS1-204ENST00000537529 OR5B21A6NL26 309 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 POM121CA8CG34 1229 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 J3QW42 95 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 NUP62P37198 522 aaPredicted RBP13.45□□□□□ -0.26
MKS1-204ENST00000537529 TGFBR3Q03167 851 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 MPV17LQ2QL34 196 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 ABCA11PQ4W5N1 156 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 BEX5Q5H9J7 111 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 PRSS54Q6PEW0 395 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 BATF2Q8N1L9 274 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 EXTL1Q92935 676 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 TOMM40LQ969M1 308 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 PHYHIPLQ96FC7 376 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 MARS2Q96GW9 593 aaKnown RBP13.45□□□□□ -0.26
MKS1-204ENST00000537529 ZNF629Q9UEG4 869 aaPredicted RBP13.45□□□□□ -0.26
MKS1-204ENST00000537529 PCNX2A6NKB5 2137 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 WDFY4Q6ZS81 3184 aa13.45□□□□□ -0.26
MKS1-204ENST00000537529 DAZAP2Q15038 168 aaPredicted RBP13.44□□□□□ -0.26
MKS1-204ENST00000537529 TFAP2EQ6VUC0 442 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 CCDC36Q8IYA8 594 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 BHLHE23Q8NDY6 225 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 RNF126Q9BV68 326 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 WDR13Q9H1Z4 485 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 LIME1Q9H400 295 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 FAM86C1Q9NVL1 165 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 SDHAF2Q9NX18 166 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 SESN1Q9Y6P5 492 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 KNTC1P50748 2209 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 MFSD2BA6NFX1 497 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 F5H0A9 414 aaPredicted RBP13.44□□□□□ -0.26
MKS1-204ENST00000537529 HOXB5P09067 269 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 LYL1P12980 280 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 WT1P19544 449 aaPredicted RBP13.44□□□□□ -0.26
MKS1-204ENST00000537529 FCGR2CP31995 323 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 PIGPP57054 158 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 UBE2NP61088 152 aaKnown RBP13.44□□□□□ -0.26
MKS1-204ENST00000537529 MRPL49Q13405 166 aaKnown RBP13.44□□□□□ -0.26
MKS1-204ENST00000537529 ZNF573Q86YE8 665 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 OR10C1Q96KK4 312 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 ZNF75AQ96N20 296 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 TRIB1Q96RU8 372 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 PLK3Q9H4B4 646 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 KCNIP3Q9Y2W7 256 aa13.44□□□□□ -0.26
MKS1-204ENST00000537529 MPTX1A8MV57 137 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 AQP7O14520 342 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 SHOXO15266 292 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 FXYD4P59646 89 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 HERV-K104P61576 105 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 GNG3P63215 75 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 LINC00596Q86U02 117 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 LRRC20Q8TCA0 184 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 MOB3AQ96BX8 217 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 MICU1Q9BPX6 476 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 REG4Q9BYZ8 158 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 OR51B6Q9H340 312 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 NAA60Q9H7X0 242 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 RASL12Q9NYN1 266 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 MTCH1Q9NZJ7 389 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 RCC2Q9P258 522 aaKnown RBP13.43□□□□□ -0.26
MKS1-204ENST00000537529 TNRC6AQ8NDV7 1962 aaKnown RBP13.43□□□□□ -0.26
MKS1-204ENST00000537529 H0YIZ8 118 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 IFNA21P01568 189 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 UCP3P55916 312 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 RBM39Q14498 530 aaKnown RBP13.43□□□□□ -0.26
MKS1-204ENST00000537529 SRSF7Q16629 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
MKS1-204ENST00000537529 Q6ZS49 121 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 FAM214BQ7L5A3 538 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 SLC38A6Q8IZM9 456 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 OR1S1Q8NH92 325 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 CDH20Q9HBT6 801 aa13.43□□□□□ -0.26
MKS1-204ENST00000537529 ZNF407Q9C0G0 2248 aa13.42□□□□□ -0.26
MKS1-204ENST00000537529 ZNF891A8MT65 544 aaPredicted RBP13.42□□□□□ -0.26
MKS1-204ENST00000537529 ZNF14P17017 642 aaPredicted RBP13.42□□□□□ -0.26
MKS1-204ENST00000537529 IGHV1-2P23083 117 aa13.42□□□□□ -0.26
MKS1-204ENST00000537529 HAGHLQ6PII5 290 aaPredicted RBP13.42□□□□□ -0.26
MKS1-204ENST00000537529 PKIBQ9C010 78 aa13.42□□□□□ -0.26
MKS1-204ENST00000537529 SPACA1Q9HBV2 294 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms