RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 F8VWA3 439 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 SDHDO14521 159 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 RIPK2O43353 540 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 HLA-DQA2P01906 255 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 OR5H8P0DN80 308 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 CRABP1P29762 137 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 SOX6P35712 828 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 NPBWR2P48146 333 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 CX3CR1P49238 355 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 PRRX1P54821 245 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 FXYD6P3P58550 94 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 PRKCDQ05655 676 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 RAB40BQ12829 278 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 DYRK1AQ13627 763 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 KLF5Q13887 457 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-217ENST00000537162 ANKDD1AQ495B1 522 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 SLC36A3Q495N2 470 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 ZBED5Q49AG3 693 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 MSANTD1Q6ZTZ1 278 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 DCXRQ7Z4W1 244 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 POM121L12Q8N7R1 296 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 ZNRF4Q8WWF5 429 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 FMO2Q99518 471 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 MBNL3Q9NUK0 354 aaKnown RBP7.03□□□□□ -1.28
CPSF7-217ENST00000537162 CHCHD3Q9NX63 227 aaKnown RBP7.03□□□□□ -1.28
CPSF7-217ENST00000537162 OR6C3Q9NZP0 311 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 MDFICQ9P1T7 246 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 TP53TG1Q9Y2A0 90 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 SH3GLB1Q9Y371 365 aa7.03□□□□□ -1.28
CPSF7-217ENST00000537162 AGRNO00468 2067 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-217ENST00000537162 TRAV41A0A0B4J266 112 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 TVP23AA6NH52 213 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 A6NHS1 94 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 ZNF736B4DX44 427 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-217ENST00000537162 MPZL2O60487 215 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 SLC2A2P11168 524 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-217ENST00000537162 GPX2P18283 190 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 REG1BP48304 166 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 SYNJ2BPP57105 145 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 GNG11P61952 73 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 TAF13Q15543 124 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-217ENST00000537162 LRIF1Q5T3J3 769 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 DNM1P34Q6PK57 102 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 TBPL2Q6SJ96 375 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 ADCK1Q86TW2 530 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 CNPY4Q8N129 248 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 TMEM217Q8N7C4 229 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 MINDY2Q8NBR6 621 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 C11orf45Q8TAV5 145 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 IFT81Q8WYA0 676 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 SLAMF6Q96DU3 332 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 NMNAT3Q96T66 252 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 SORT1Q99523 831 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 PLEKHA1Q9HB21 404 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 BRD7Q9NPI1 651 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 RPRD1BQ9NQG5 326 aaKnown RBP7.02□□□□□ -1.29
CPSF7-217ENST00000537162 PCDHB16Q9NRJ7 776 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 SLC2A8Q9NY64 477 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 DNAJC27Q9NZQ0 273 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 ZNF107Q9UII5 783 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-217ENST00000537162 FBXL7Q9UJT9 491 aa7.02□□□□□ -1.29
CPSF7-217ENST00000537162 A0A087X0M5 115 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 TRBV5-3A0A0A0MS03 114 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 A0A1B0GX30 115 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 NOS1APO75052 506 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-217ENST00000537162 RENP00797 406 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 VAMP1P23763 118 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 POLR2JP52435 117 aaKnown RBP7.01□□□□□ -1.29
CPSF7-217ENST00000537162 ZNF121P58317 390 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-217ENST00000537162 GALEQ14376 348 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 GRK1Q15835 563 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 CEACAM21Q3KPI0 293 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 C19orf54Q5BKX5 351 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 MOB3BQ86TA1 216 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 OR8H3Q8N146 312 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 SNX22Q96L94 193 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 HIST1H2AAQ96QV6 131 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 ABCB9Q9NP78 766 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 PARP11Q9NR21 331 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 PNPOQ9NVS9 261 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 RHCGQ9UBD6 479 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 IL36RNQ9UBH0 155 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 SELENOKQ9Y6D0 94 aa7.01□□□□□ -1.29
CPSF7-217ENST00000537162 IGHV1-3A0A0C4DH29 117 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 SMIM23A6NLE4 172 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 SPAG7O75391 227 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 SCAF4O95104 1147 aaKnown RBP7□□□□□ -1.29
CPSF7-217ENST00000537162 TXNDC12O95881 172 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 SHBGP04278 402 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 BPGMP07738 259 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 NFYBP25208 207 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 PYCR1P32322 319 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 RPL14P50914 215 aaKnown RBP7□□□□□ -1.29
CPSF7-217ENST00000537162 RAB7AP51149 207 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 MFAP2P55001 183 aa7□□□□□ -1.29
CPSF7-217ENST00000537162 ERVK11-1P61568 191 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms