RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MKXQ8IYA7 352 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 CMTM4Q8IZR5 234 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 FAM58AQ8N1B3 248 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 C11orf42Q8N5U0 333 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 ASCC1Q8N9N2 400 aaKnown RBP10.78□□□□□ -0.68
PRKDC-206ENST00000536429 OR52N4Q8NGI2 321 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 GPR148Q8TDV2 347 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 GHSRQ92847 366 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 SMIM19Q96E16 107 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 PGLYRP3Q96LB9 341 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 DMRTB1Q96MA1 342 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 PRDM13Q9H4Q3 707 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 CNOT2Q9NZN8 540 aaKnown RBP10.78□□□□□ -0.68
PRKDC-206ENST00000536429 M0R1W7 72 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 PSPNO60542 156 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 KDM4BO94953 1096 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 ALX3O95076 343 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 CHRM2P08172 466 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 MELTFP08582 738 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 HCKP08631 526 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 RPSAP08865 295 aaKnown RBP10.77□□□□□ -0.69
PRKDC-206ENST00000536429 BPIFB3P59826 476 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 RPS11P62280 158 aaKnown RBP eCLIP10.77□□□□□ -0.69
PRKDC-206ENST00000536429 KISS1Q15726 138 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 DMKNQ6E0U4 476 aaPredicted RBP10.77□□□□□ -0.69
PRKDC-206ENST00000536429 Q6YL49 198 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 TCF23Q7RTU1 214 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 TPRX1Q8N7U7 411 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 OR5D14Q8NGL3 314 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 HAVCR2Q8TDQ0 301 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 CHST6Q9GZX3 395 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 METTL8Q9H825 291 aaKnown RBP10.77□□□□□ -0.69
PRKDC-206ENST00000536429 HMG20AQ9NP66 347 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 PAK1IP1Q9NWT1 392 aaPredicted RBP10.77□□□□□ -0.69
PRKDC-206ENST00000536429 CHCHD3Q9NX63 227 aaKnown RBP10.77□□□□□ -0.69
PRKDC-206ENST00000536429 GSTK1Q9Y2Q3 226 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF281Q9Y2X9 895 aa10.77□□□□□ -0.69
PRKDC-206ENST00000536429 CMYA5Q8N3K9 4069 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 TRBV5-5A0A0J9YX44 114 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 TMEM89A2RUT3 159 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 CLDN34H7C241 214 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 CYB5AP00167 134 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 RNASE1P07998 156 aaKnown RBP10.76□□□□□ -0.69
PRKDC-206ENST00000536429 RAB3AP20336 220 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 DLX6P56179 175 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 EDDM3AQ14507 147 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF146Q15072 292 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 C6orf141Q5SZD1 244 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
PRKDC-206ENST00000536429 C1orf122Q6ZSJ8 110 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 Q8IYB0 196 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 STX19Q8N4C7 294 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 OR4S1Q8NGB4 309 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 C17orf50Q8WW18 174 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 GCDHQ92947 438 aaPredicted RBP10.76□□□□□ -0.69
PRKDC-206ENST00000536429 TMEM106AQ96A25 262 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 UNKLQ9H9P5 680 aaKnown RBP10.76□□□□□ -0.69
PRKDC-206ENST00000536429 NEK6Q9HC98 313 aa10.76□□□□□ -0.69
PRKDC-206ENST00000536429 A0A1W2PPK0 400 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 PTGES3LE9PB15 166 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 H0YJX3 145 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 SIRPB1O00241 398 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 GABRPO00591 440 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 NPFFO15130 113 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 CDK1P06493 297 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 TMEM225BP0DP42 221 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 GABRR1P24046 479 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 PAX6P26367 422 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 OR3A1P47881 315 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 EDDM3BP56851 147 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 MED21Q13503 144 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 SATL1Q86VE3 508 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 OR8H2Q8N162 312 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 NANOGP1Q8N7R0 232 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 AJUBAQ96IF1 538 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 SNX22Q96L94 193 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 CHIAQ9BZP6 476 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 NOX4Q9NPH5 578 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 PCDHGB5Q9Y5G0 923 aa10.75□□□□□ -0.69
PRKDC-206ENST00000536429 TRAV8-7A0A075B6U6 113 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 MYL12BO14950 172 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 OR2H2O95918 312 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 HKR1P10072 659 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 IGFBP3P17936 291 aaPredicted RBP10.74□□□□□ -0.69
PRKDC-206ENST00000536429 MYF6P23409 242 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 COX7A1P24310 79 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 SAA4P35542 130 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 OR3A4PP47883 348 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 COMPP49747 757 aaPredicted RBP10.74□□□□□ -0.69
PRKDC-206ENST00000536429 UBE2E1P51965 193 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 WNT4P56705 351 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 BLMHQ13867 455 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 GRK1Q15835 563 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 Q6P435 159 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 C16orf87Q6PH81 154 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 IZUMO2Q6UXV1 221 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms