RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PXT1Q8NFP0 134 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 EMG1Q92979 244 aaKnown RBP10.03□□□□□ -0.8
CHD4-203ENST00000535717 TMEM186Q96B77 213 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 SSBP3Q9BWW4 388 aaPredicted RBP10.03□□□□□ -0.8
CHD4-203ENST00000535717 HMG20AQ9NP66 347 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 CLN8Q9UBY8 286 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 POLR3KQ9Y2Y1 108 aaPredicted RBP10.03□□□□□ -0.8
CHD4-203ENST00000535717 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 TRAV20A0A0B4J274 112 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 MEGF11A6BM72 1044 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 NKX6-3A6NJ46 265 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 SIGLEC5O15389 551 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 CDRT1O95170 752 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 JUNBP17275 347 aaPredicted RBP10.02□□□□□ -0.81
CHD4-203ENST00000535717 PRKACAP17612 351 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 GALP22466 123 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 DVL1P1P54792 670 aaPredicted RBP10.02□□□□□ -0.81
CHD4-203ENST00000535717 IL13RA1P78552 427 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 IKZF1Q13422 519 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 DGUOKQ16854 277 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 GLCCI1Q86VQ1 547 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 NKAIN3Q8N8D7 197 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 PNLDC1Q8NA58 520 aaKnown RBP10.02□□□□□ -0.81
CHD4-203ENST00000535717 OR10K1Q8NGX5 313 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 SDSLQ96GA7 329 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 MED30Q96HR3 178 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 CNTD2Q9H8S5 307 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 ELL3Q9HB65 397 aaPredicted RBP10.02□□□□□ -0.81
CHD4-203ENST00000535717 RHOFQ9HBH0 211 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 OR14J1Q9UGF5 321 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 RSL24D1Q9UHA3 163 aaKnown RBP10.02□□□□□ -0.81
CHD4-203ENST00000535717 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 MAB21L2Q9Y586 359 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 SVEP1Q4LDE5 3571 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 DOCK11Q5JSL3 2073 aa10.02□□□□□ -0.81
CHD4-203ENST00000535717 A8MV72 311 aaPredicted RBP10.01□□□□□ -0.81
CHD4-203ENST00000535717 NDUFB3O43676 98 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 CD37P11049 281 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 CD36P16671 472 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 DUSP1P28562 367 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 NPY4RP50391 375 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 SNU13P55769 128 aaKnown RBP10.01□□□□□ -0.81
CHD4-203ENST00000535717 PAX2Q02962 417 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 RSU1Q15404 277 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 ELP2Q6IA86 826 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 C22orf42Q6IC83 251 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 ZNRF1Q8ND25 227 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 Q8NFD4 153 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 OR4D6Q8NGJ1 314 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 BORCS5Q969J3 196 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 GFI1Q99684 422 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 UQCC2Q9BRT2 126 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 SLITRK2Q9H156 845 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 OR51E2Q9H255 320 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 MMP26Q9NRE1 261 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 OR5V1Q9UGF6 321 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 KCNS2Q9ULS6 477 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 STUB1Q9UNE7 303 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 ING4Q9UNL4 249 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 MRPS28Q9Y2Q9 187 aaKnown RBP10.01□□□□□ -0.81
CHD4-203ENST00000535717 WNK2Q9Y3S1 2297 aa10.01□□□□□ -0.81
CHD4-203ENST00000535717 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
CHD4-203ENST00000535717 LOC105371242A0A075B767 164 aa10□□□□□ -0.81
CHD4-203ENST00000535717 TRAV1-2A0A0B4J238 106 aa10□□□□□ -0.81
CHD4-203ENST00000535717 PPIAL4CA0A0B4J2A2 164 aa10□□□□□ -0.81
CHD4-203ENST00000535717 SHISA3A0PJX4 238 aa10□□□□□ -0.81
CHD4-203ENST00000535717 C22orf46C9J442 243 aa10□□□□□ -0.81
CHD4-203ENST00000535717 HAND1O96004 215 aa10□□□□□ -0.81
CHD4-203ENST00000535717 GADD45AP24522 165 aa10□□□□□ -0.81
CHD4-203ENST00000535717 FGF9P31371 208 aaPredicted RBP10□□□□□ -0.81
CHD4-203ENST00000535717 MTNR1BP49286 362 aa10□□□□□ -0.81
CHD4-203ENST00000535717 FGF12P61328 243 aa10□□□□□ -0.81
CHD4-203ENST00000535717 COL10A1Q03692 680 aa10□□□□□ -0.81
CHD4-203ENST00000535717 ZNF146Q15072 292 aa10□□□□□ -0.81
CHD4-203ENST00000535717 LRRC10Q5BKY1 277 aa10□□□□□ -0.81
CHD4-203ENST00000535717 SPIN3Q5JUX0 258 aa10□□□□□ -0.81
CHD4-203ENST00000535717 C1orf100Q5SVJ3 147 aa10□□□□□ -0.81
CHD4-203ENST00000535717 FIP1L1Q6UN15 594 aaKnown RBP10□□□□□ -0.81
CHD4-203ENST00000535717 GLIPR1L1Q6UWM5 242 aa10□□□□□ -0.81
CHD4-203ENST00000535717 ZNF561Q8N587 486 aa10□□□□□ -0.81
CHD4-203ENST00000535717 ST8SIA4Q92187 359 aa10□□□□□ -0.81
CHD4-203ENST00000535717 DACT3Q96B18 629 aaPredicted RBP10□□□□□ -0.81
CHD4-203ENST00000535717 FOXRED1Q96CU9 486 aaPredicted RBP10□□□□□ -0.81
CHD4-203ENST00000535717 C1orf147Q96MC9 270 aaPredicted RBP10□□□□□ -0.81
CHD4-203ENST00000535717 S100A13Q99584 98 aa10□□□□□ -0.81
CHD4-203ENST00000535717 METTL9Q9H1A3 318 aa10□□□□□ -0.81
CHD4-203ENST00000535717 SEBOXQ9HB31 216 aaPredicted RBP10□□□□□ -0.81
CHD4-203ENST00000535717 EXOSC4Q9NPD3 245 aaKnown RBP10□□□□□ -0.81
CHD4-203ENST00000535717 TXNL4BQ9NX01 149 aaKnown RBP10□□□□□ -0.81
CHD4-203ENST00000535717 IL36GQ9NZH8 169 aa10□□□□□ -0.81
CHD4-203ENST00000535717 SLC25A10Q9UBX3 287 aaPredicted RBP10□□□□□ -0.81
CHD4-203ENST00000535717 GSTK1Q9Y2Q3 226 aa10□□□□□ -0.81
CHD4-203ENST00000535717 AK6Q9Y3D8 172 aaKnown RBP10□□□□□ -0.81
CHD4-203ENST00000535717 IGHV2-70DA0A0C4DH43 119 aa9.99□□□□□ -0.81
CHD4-203ENST00000535717 A0A0G2JMP0 313 aa9.99□□□□□ -0.81
CHD4-203ENST00000535717 A0A0X1KG70 313 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms