RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 C16orf82Q7Z2V1 217 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 KCTD20Q7Z5Y7 419 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 CENPVQ7Z7K6 275 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 RTN4RL2Q86UN3 420 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 FAM58AQ8N1B3 248 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 DNAAF1Q8NEP3 725 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 OR11H6Q8NGC7 330 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 SPSB1Q96BD6 273 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 EXOSC4Q9NPD3 245 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-205ENST00000535452 A0A1W2PQL4 384 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 DAPL1A0PJW8 107 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 MAGEB3O15480 346 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 MAGEB4O15481 346 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 PF4P02776 101 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 PRKACAP17612 351 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 BNIP1Q12981 228 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 KHDC1LQ5JSQ8 128 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 CCDC144NLQ6NUI1 221 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 BCDIN3DQ7Z5W3 292 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 LHFPL4Q7Z7J7 247 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 CATSPERDQ86XM0 798 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 TMEM219Q86XT9 240 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 OR4X2Q8NGF9 303 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 OR4D6Q8NGJ1 314 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 MRAPQ8TCY5 172 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 CFHR4Q92496 578 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 DPF1Q92782 380 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 OR5M11Q96RB7 305 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 TMEM133Q9H2Q1 129 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 UBE2J1Q9Y385 318 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 PKD1L1Q8TDX9 2849 aa10.72□□□□□ -0.69
CLSTN3-205ENST00000535452 TRBV2A0A0J9YWF9 115 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 A0A1B0GTI1 187 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 LOC107986453A0A1B0GWG9 222 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 FAM90A8PA6NJQ4 464 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 LEUTXA8MZ59 168 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 G3V4G9 280 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 SRSF10O75494 262 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 HTR1AP08908 422 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 ZNF44P15621 663 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 RAB13P51153 203 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 DYNLT3P51808 116 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 PRRX1P54821 245 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 SNU13P55769 128 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 ERVK11-1P61568 191 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 FBLN7Q53RD9 439 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 KDM4DQ6B0I6 523 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 C10orf67Q8IYJ2 551 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 TRUB1Q8WWH5 349 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 UTP4Q969X6 686 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 OPALINQ96PE5 141 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 CHST6Q9GZX3 395 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 GABARAPL1Q9H0R8 117 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 RHOFQ9HBH0 211 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 NECAP2Q9NVZ3 263 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 MTCH1Q9NZJ7 389 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 GSTK1Q9Y2Q3 226 aa10.71□□□□□ -0.69
CLSTN3-205ENST00000535452 IGHV2-26A0A0B4J1V2 119 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 A6NDX4 124 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 ODF3BA8MYP8 253 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 PRR32B1ATL7 298 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 M0QZK8 103 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 M0R129 80 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 CHST1O43916 411 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 MITFO75030 526 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 ALX3O95076 343 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 HCKP08631 526 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 PAX6P26367 422 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 P2RX3P56373 397 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 SCN1BQ07699 218 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 UBE2V2Q15819 145 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 MEDAGQ5VYS4 303 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 OR13C3Q8NGS6 347 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 CENPNQ96H22 339 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 CIB1Q99828 191 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 GPR61Q9BZJ8 451 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 PCDHB16Q9NRJ7 776 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 DPM3Q9P2X0 92 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 HHLA2Q9UM44 414 aa10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 AMMECR1Q9Y4X0 333 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-205ENST00000535452 MEX3AA1L020 520 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 SIRPB1O00241 398 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 DYNC1I1O14576 645 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 ZNF737O75373 536 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 APOL3O95236 402 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 CD28P10747 220 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 ATF1P18846 271 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 ERP29P30040 261 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 PTGFRP43088 359 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 SLC35A2P78381 396 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 TP53I3Q53FA7 332 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 Q6ZSR3 168 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 AMIGO2Q86SJ2 522 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 LYG1Q8N1E2 194 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 ABHD12Q8N2K0 398 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 ZNF565Q8N9K5 539 aa10.69□□□□□ -0.7
CLSTN3-205ENST00000535452 CHST4Q8NCG5 386 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms