RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 METTL8Q9H825 291 aaKnown RBP7.8□□□□□ -1.16
SSBP3-215ENST00000533946 PLEKHA1Q9HB21 404 aa7.8□□□□□ -1.16
SSBP3-215ENST00000533946 NKX1-2Q9UD57 310 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-215ENST00000533946 ENOPH1Q9UHY7 261 aa7.8□□□□□ -1.16
SSBP3-215ENST00000533946 SLC7A11Q9UPY5 501 aa7.8□□□□□ -1.16
SSBP3-215ENST00000533946 FAM96BQ9Y3D0 163 aa7.8□□□□□ -1.16
SSBP3-215ENST00000533946 CLPSL1A2RUU4 121 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 GPR37O15354 613 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 NDUFA7O95182 113 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 TSPAN15O95858 294 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ISG15P05161 165 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 UBCP0CG48 685 aaKnown RBP7.79□□□□□ -1.16
SSBP3-215ENST00000533946 GLIPR1P48060 266 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 EDDM3BP56851 147 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 BPIFB3P59826 476 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ADARB1P78563 741 aaKnown RBP7.79□□□□□ -1.16
SSBP3-215ENST00000533946 SCN1BQ07699 218 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 CDK5R1Q15078 307 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ZSCAN26Q16670 478 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 PRR31Q5SQ13 230 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 PRAMEF5Q5TYX0 476 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 FAM220AQ7Z4H9 259 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 CMTM4Q8IZR5 234 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 FAM58AQ8N1B3 248 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 TMEM86BQ8N661 226 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ZNF676Q8N7Q3 588 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 BEND2Q8NDZ0 799 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 BORCS8Q96FH0 119 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 COQ2Q96H96 371 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 CITED1Q99966 193 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ADI1Q9BV57 179 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ZMAT3Q9HA38 289 aaKnown RBP7.79□□□□□ -1.16
SSBP3-215ENST00000533946 MRPS18AQ9NVS2 196 aaKnown RBP7.79□□□□□ -1.16
SSBP3-215ENST00000533946 TAS2R4Q9NYW5 299 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 VPREB3Q9UKI3 123 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 GSTK1Q9Y2Q3 226 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 RNF114Q9Y508 228 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 ORC6Q9Y5N6 252 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 MMP24Q9Y5R2 645 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 POMT1Q9Y6A1 747 aa7.79□□□□□ -1.16
SSBP3-215ENST00000533946 TRBV23-1A0A0A0MS06 115 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 A0A1W2PP11 408 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 A0A1W2PPK0 400 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 FAM90A8PA6NJQ4 464 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 SH2D7A6NKC9 451 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-215ENST00000533946 ODF3BA8MYP8 253 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 SLC1A7O00341 560 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 HSPB6O14558 160 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 XPNPEP2O43895 674 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 OR2H2O95918 312 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 IGHV3-7P01780 117 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 FBP1P09467 338 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 ZNF20P17024 532 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 GABRR1P24046 479 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 EEF1B2P24534 225 aaKnown RBP7.78□□□□□ -1.16
SSBP3-215ENST00000533946 RBP2P50120 134 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 CCR9P51686 369 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 AESQ08117 197 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 INSL4Q14641 139 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 RCN1Q15293 331 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 GRK1Q15835 563 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 C11orf91Q3C1V1 193 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 TMEM95Q3KNT9 176 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 ZNF691Q5VV52 312 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 TMEM244Q5VVB8 128 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 MEDAGQ5VYS4 303 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 BRICD5Q6PL45 260 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 UTS2BQ765I0 119 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 ZNF485Q8NCK3 441 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 TBC1D15Q8TC07 691 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 NRG4Q8WWG1 115 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 CYGBQ8WWM9 190 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 DYRK2Q92630 601 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 GGHQ92820 318 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 OPALINQ96PE5 141 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 NR1H4Q96RI1 486 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-215ENST00000533946 HMG20AQ9NP66 347 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 FGF20Q9NP95 211 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-215ENST00000533946 HHLA2Q9UM44 414 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 POLDIP2Q9Y2S7 368 aa7.78□□□□□ -1.16
SSBP3-215ENST00000533946 A0A0G2JK05 382 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 TRBV2A0A0J9YWF9 115 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 PNMA8CA0A1B0GUJ8 204 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 GABRPO00591 440 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 GATBO75879 557 aaKnown RBP7.77□□□□□ -1.17
SSBP3-215ENST00000533946 KDM4BO94953 1096 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 CDRT1O95170 752 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 ARG1P05089 322 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 CRYBA1P05813 215 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 CHRM2P08172 466 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 IGHV1-8P0DP01 117 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 OR3A4PP47883 348 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 ATP1B3P54709 279 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 RPS11P62280 158 aaKnown RBP eCLIP7.77□□□□□ -1.17
SSBP3-215ENST00000533946 ACTC1P68032 377 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 ACTA1P68133 377 aa7.77□□□□□ -1.17
SSBP3-215ENST00000533946 SSX2Q16385 188 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms