RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 SMIM11AP58511 58 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 DIAPH2-AS1Q14236 149 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 HNF4GQ14541 408 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 PNLIPRP3Q17RR3 467 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 ZNF684Q5T5D7 378 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 TMEM42Q69YG0 159 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 FAM53AQ6NSI3 398 aaPredicted RBP9.56□□□□□ -0.88
SVIP-205ENST00000533774 ARPINQ7Z6K5 226 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 RTN4RL2Q86UN3 420 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 THNSL2Q86YJ6 484 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 OR11H1Q8NG94 326 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 OR56B4Q8NH76 319 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 ZNF596Q8TC21 504 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 DYDC1Q8WWB3 177 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 ARMC1Q9NVT9 282 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 POLDIP2Q9Y2S7 368 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 AP3M1Q9Y2T2 418 aa9.56□□□□□ -0.88
SVIP-205ENST00000533774 IGKV1-27A0A075B6S5 117 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 A0A1W2PPI3 338 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 PRR32B1ATL7 298 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 PRR23D1E9PI22 279 aaPredicted RBP9.55□□□□□ -0.88
SVIP-205ENST00000533774 LDLRAD4O15165 306 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 FGF16O43320 207 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 GASTP01350 101 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 FAM106CPP0CH98 169 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 PRR23D2P0DMB1 279 aaPredicted RBP9.55□□□□□ -0.88
SVIP-205ENST00000533774 GP9P14770 177 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 INSL3P51460 131 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 BLVRAP53004 296 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 HCCSP53701 268 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 GPR50Q13585 617 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 MAPRE2Q15555 327 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 GRK1Q15835 563 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 GLYATQ6IB77 296 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 RPL13AP3Q6NVV1 102 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 HEPN1Q6WQI6 88 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 RASSF6Q6ZTQ3 369 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 TRMT10AQ8TBZ6 339 aaKnown RBP9.55□□□□□ -0.88
SVIP-205ENST00000533774 C4orf3Q8WVX3 66 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 KCTD14Q9BQ13 255 aaPredicted RBP9.55□□□□□ -0.88
SVIP-205ENST00000533774 ISYNA1Q9NPH2 558 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 ENPP5Q9UJA9 477 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 U3KQV3 271 aa9.55□□□□□ -0.88
SVIP-205ENST00000533774 A6NHS1 94 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 SOX14O95416 240 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 TMEM11P17152 192 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 MYF6P23409 242 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 PEX2P28328 305 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 DUSP1P28562 367 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 IFNGR2P38484 337 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 OR3A1P47881 315 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 CFHR3Q02985 330 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 IL24Q13007 206 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 FOXE3Q13461 319 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 KIAA0141Q14154 515 aaPredicted RBP9.54□□□□□ -0.88
SVIP-205ENST00000533774 RBM39Q14498 530 aaKnown RBP9.54□□□□□ -0.88
SVIP-205ENST00000533774 CXorf66Q5JRM2 361 aaPredicted RBP9.54□□□□□ -0.88
SVIP-205ENST00000533774 FAM27D1Q5T7N8 215 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 COMMD2Q86X83 199 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 Q8N1Y9 231 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 RNF148Q8N7C7 305 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 SLAMF9Q96A28 289 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 CADM1Q9BY67 442 aaKnown RBP9.54□□□□□ -0.88
SVIP-205ENST00000533774 PKIBQ9C010 78 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 PBOV1Q9GZY1 135 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 DNAJB9Q9UBS3 223 aa9.54□□□□□ -0.88
SVIP-205ENST00000533774 UBE2J1Q9Y385 318 aaPredicted RBP9.54□□□□□ -0.88
SVIP-205ENST00000533774 OOSP1A8MZH6 123 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 GSC2O15499 205 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 HAND1O96004 215 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 ATP6V1B1P15313 513 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 GABRR1P24046 479 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 CEACAM3P40198 252 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 MNDAP41218 407 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 GPR12P47775 334 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 P2RX3P56373 397 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 ESRRGP62508 458 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 ZNF91Q05481 1191 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 MFGE8Q08431 387 aaPredicted RBP9.53□□□□□ -0.88
SVIP-205ENST00000533774 HES1Q14469 280 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
SVIP-205ENST00000533774 CLVS2Q5SYC1 327 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
SVIP-205ENST00000533774 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 OR52W1Q6IF63 320 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 CGB2Q6NT52 195 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 FOXRED2Q8IWF2 684 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 DCUN1D4Q92564 292 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 PYURFQ96I23 114 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 CEP19Q96LK0 163 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 SIKE1Q9BRV8 207 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 OR51V1Q9H2C8 321 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 GNB4Q9HAV0 340 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 CMC2Q9NRP2 79 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 INTS9Q9NV88 658 aaKnown RBP9.53□□□□□ -0.88
SVIP-205ENST00000533774 C19orf73Q9NVV2 129 aa9.53□□□□□ -0.88
SVIP-205ENST00000533774 SAMD4AQ9UPU9 718 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms