RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 C1QL2Q7Z5L3 287 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CLVS1Q8IUQ0 354 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-217ENST00000533666 BATF2Q8N1L9 274 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CHST4Q8NCG5 386 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 Q8NFD4 153 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 RAB2BQ8WUD1 216 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 SDSLQ96GA7 329 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 CCL13Q99616 98 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
CMTM1-217ENST00000533666 ZANQ9Y493 2812 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 A0A096LNT2 108 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 F5H0A9 414 aaPredicted RBP11.75□□□□□ -0.53
CMTM1-217ENST00000533666 F8VVB4 439 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 F8VWA3 439 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 DEGS1O15121 323 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 SIGLEC5O15389 551 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 GABARAPO95166 117 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
CMTM1-217ENST00000533666 HAND1O96004 215 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 INHBBP09529 407 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 CFPP27918 469 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 TMBIM6P55061 237 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 MXD1Q05195 221 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 USP43Q70EL4 1123 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 OR2W3Q7Z3T1 314 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 OR51T1Q8NGJ9 327 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 OR5D13Q8NGL4 314 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 OR10K1Q8NGX5 313 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 URM1Q9BTM9 101 aaKnown RBP11.75□□□□□ -0.53
CMTM1-217ENST00000533666 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CMTM1-217ENST00000533666 FAM234AQ9H0X4 552 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 SPACA1Q9HBV2 294 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 ST3GAL6Q9Y274 331 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 F8P00451 2351 aa11.75□□□□□ -0.53
CMTM1-217ENST00000533666 CR1P17927 2039 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 ZNF44P15621 663 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 MGMTP16455 207 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 RBMXP38159 391 aaKnown RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 SERPINB10P48595 397 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 SNU13P55769 128 aaKnown RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 RBM11P57052 281 aaKnown RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 HOXA4Q00056 320 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 IKZF1Q13422 519 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 P2RY14Q15391 338 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 MPV17LQ2QL34 196 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 HES5Q5TA89 166 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 FAM166AQ6J272 317 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 SFXN4Q6P4A7 337 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 LYPD2Q6UXB3 125 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 ASCC1Q8N9N2 400 aaKnown RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 FAM3DQ96BQ1 224 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 C1orf159Q96HA4 380 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 GFI1Q99684 422 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 NKX3-1Q99801 234 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 TMUB1Q9BVT8 246 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 TMEM59Q9BXS4 323 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 SLC25A10Q9UBX3 287 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-217ENST00000533666 ZNF222Q9UK12 451 aa11.74□□□□□ -0.53
CMTM1-217ENST00000533666 TRAV20A0A0B4J274 112 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 SHISA3A0PJX4 238 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A10PA6NDY2 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A18PA6NE21 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A16PA6NEW6 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A20PA6NIJ5 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A8PA6NJQ4 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A7PA6NKC0 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A22PA8MWA6 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A12PA8MX19 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A5PA8MXJ8 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A23PA8MXZ1 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 DVL1O14640 695 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 OR7C1O76099 320 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-217ENST00000533666 MSMBP08118 114 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A15PP0C7V4 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A13PP0C7W8 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A14PP0C7W9 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 FAM90A24PP0C7X0 464 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 CALCBP10092 127 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 NDUFB7P17568 137 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 GABRR1P24046 479 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
CMTM1-217ENST00000533666 CAV3P56539 151 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 SCAND1P57086 179 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 OR10A3P58181 314 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 VBP1P61758 197 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 COL10A1Q03692 680 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 SCN1BQ07699 218 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 WDR25Q64LD2 544 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-217ENST00000533666 SLC16A12Q6ZSM3 486 aa11.73□□□□□ -0.53
CMTM1-217ENST00000533666 GLCCI1Q86VQ1 547 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms