RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 LMX1BO60663 402 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 CRLF1O75462 422 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 SRD5A1P18405 259 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 AZGP1P25311 298 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 CD200P41217 278 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 LMO4P61968 165 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 BTG1P62324 171 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ACTC1P68032 377 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ACTA1P68133 377 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 RELQ04864 619 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC34A1Q06495 639 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 MFGE8Q08431 387 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 HNRNPA0Q13151 305 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 MAB21L1Q13394 359 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR8B8Q15620 311 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 BCL2L15Q5TBC7 163 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRAMEF6Q5VXH4 476 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 LPCAT4Q643R3 524 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 PLEKHG7Q6ZR37 379 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 Q6ZWC4 215 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ENTHD1Q8IYW4 607 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 C1orf87Q8N0U7 546 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 SPICQ8N5J4 248 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 PACRGLQ8N7B6 248 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 YIPF7Q8N8F6 280 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR11L1Q8NGX0 322 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR51F2Q8NH61 342 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF420Q8TAQ5 688 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 DVL3Q92997 716 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ERGIC1Q969X5 290 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 RDH12Q96NR8 316 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 PAPOLGQ9BWT3 736 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 PBOV1Q9GZY1 135 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 MOB1AQ9H8S9 216 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 FN3KRPQ9HA64 309 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 LPAR2Q9HBW0 351 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 UFSP2Q9NUQ7 469 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 UBAP1Q9NZ09 502 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 CNOT2Q9NZN8 540 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 NUFIP1Q9UHK0 495 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 MRM2Q9UI43 246 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 KCNS2Q9ULS6 477 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 PCDHGB1Q9Y5G3 927 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 R4GMQ9 66 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ACANP16112 2415 aa4.84□□□□□ -1.64
HMGB1P42-201ENST00000532126 MED13LQ71F56 2210 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 A0A0U1RQV5 110 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF816-ZNF321PA0A0X1KG74 233 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 DAPL1A0PJW8 107 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 METTL15A6NJ78 407 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF850A8MQ14 1090 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 LOC110117498-PIK3R3F6TDL0 507 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 DLGAP1O14490 977 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 VCYO14598 125 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM20BO75063 409 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MTRF1O75570 445 aaKnown RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 SULT1C4O75897 302 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RPP14O95059 124 aaKnown RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 CYB5R3P00387 301 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 CST4P01036 141 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 IGHV2-70P01814 119 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 TTRP02766 147 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MSMBP08118 114 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF735P0CB33 412 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 HNF1AP20823 631 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 PCMT1P22061 227 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RBMXP38159 391 aaKnown RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 CAPGP40121 348 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MDH2P40926 338 aaKnown RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 PMELP40967 661 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 DVL1P1P54792 670 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ELF3P78545 371 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 IL5RAQ01344 420 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF85Q03923 595 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF91Q05481 1191 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RIPPLY1Q0D2K3 151 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 PRDX4Q13162 271 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MPPED2Q15777 294 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF181Q2M3W8 571 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 CHRFAM7AQ494W8 412 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMEM155Q4W5P6 130 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF684Q5T5D7 378 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 LIPNQ5VXI9 398 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 TTC23Q5W5X9 447 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 SSX6Q7RTT6 188 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM220AQ7Z4H9 259 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 NOXA1Q86UR1 476 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 GLCCI1Q86VQ1 547 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 LRRC28Q86X40 367 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MUC20Q8N307 709 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMEM217Q8N7C4 229 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 SEMA6DQ8NFY4 1073 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RHOXF1Q8NHV9 184 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR51E1Q8TCB6 317 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 Q8TCH9 128 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 CYGBQ8WWM9 190 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 PIGCQ92535 297 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms