RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ACADSP16219 412 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 COL8A2P25067 703 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 IL2RGP31785 369 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 RBM34P42696 430 aaKnown RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NCALDP61601 193 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 GALK2Q01415 458 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 PMS2P3Q13401 168 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 TMED1Q13445 227 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ECSCRQ19T08 205 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 METTL21CQ5VZV1 264 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ACSM5Q6NUN0 579 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 TTC33Q6PID6 262 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 DLEU7Q6UYE1 221 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 WDR88Q6ZMY6 472 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SLC35D2Q76EJ3 337 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 CCDC80Q76M96 950 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 HDDC2Q7Z4H3 204 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 COMTD1Q86VU5 262 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF584Q8IVC4 421 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SKA3Q8IX90 412 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZCCHC24Q8N2G6 241 aaKnown RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SLC22A24Q8N4F4 322 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SYT14Q8NB59 555 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 OR6M1Q8NGM8 313 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 OR9I1Q8NGQ6 314 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 OR51F2Q8NH61 342 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF418Q8TF45 676 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 C11orf40Q8WZ69 217 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 MAL2Q969L2 176 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 RAB39BQ96DA2 213 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 OR52B2Q96RD2 323 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ARHGDIGQ99819 225 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 PAIP2Q9BPZ3 127 aaKnown RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ULBP2Q9BZM5 246 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NANSQ9NR45 359 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF275Q9NSD4 429 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 CENPMQ9NSP4 180 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 DDX28Q9NUL7 540 aaKnown RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF446Q9NWS9 450 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 MED29Q9NX70 200 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NKIRAS1Q9NYS0 192 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 VAPAQ9P0L0 249 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF581Q9P0T4 197 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SEC14L4Q9UDX3 406 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 KLHL21Q9UJP4 597 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF229Q9UJW7 825 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 USH1CQ9Y6N9 552 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NBEAL1Q6ZS30 2694 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 MALRD1Q5VYJ5 2156 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 IGHV1-69-2A0A0G2JMI3 117 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 M0QX08 132 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 CASQ2O14958 399 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 POLR3GO15318 223 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 VENTXO95231 258 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 LYPD3O95274 346 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 MT-ND1P03886 318 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 LYNP07948 512 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 CD55P08174 381 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 MELTFP08582 738 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 MMP7P09237 267 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 PPIAL4GP0DN37 164 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 THRBP10828 461 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 CD79AP11912 226 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SOX6P35712 828 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SRP14P37108 136 aaKnown RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 ALDH3B1P43353 468 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 CSNK1A1P48729 337 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 KLF3P57682 345 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 RGS8P57771 180 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 MAGOHP61326 146 aaKnown RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 HOXC5Q00444 222 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 TRIP10Q15642 601 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 CARTPTQ16568 116 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 DUSP7Q16829 419 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SLC36A2Q495M3 483 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 PAGE3Q5JUK9 113 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 C10orf128Q5T292 105 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 FAM27BQ5VT28 67 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 C12orf54Q6X4T0 127 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 TMUB2Q71RG4 321 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 C10orf111Q8N326 155 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 GPR32P1Q8NGA4 272 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 OR6N1Q8NGY5 312 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 OR4F5Q8NH21 305 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 NANPQ8TBE9 248 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SYNPRQ8TBG9 265 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 ADAMTS16Q8TE57 1224 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 HIST1H2ACQ93077 130 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 TOMM40LQ969M1 308 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 MCHR1Q99705 422 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SH3GL1Q99961 368 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SIKE1Q9BRV8 207 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 EMC6Q9BV81 110 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 NCOR1P1Q9H4R4 102 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 METTL17Q9H7H0 456 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 KAT8Q9H7Z6 458 aaKnown RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 SIAEQ9HAT2 523 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms