RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 SDHAF3Q9NRP4 125 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 RBM22Q9NW64 420 aaKnown RBP eCLIP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 DNAJC27Q9NZQ0 273 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 FBXL3Q9UKT7 428 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 RAB22AQ9UL26 194 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 PLA2R1Q13018 1463 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 SLIT3O75094 1523 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ELP1O95163 1332 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IGKV2-28A0A075B6P5 120 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IGHV1-3A0A0C4DH29 117 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IGKV1-6A0A0C4DH72 117 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ZNF850A8MQ14 1090 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 SULT1C2O00338 296 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 UPK2O00526 184 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 FFAR1O14842 300 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 UBDO15205 165 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 TOX3O15405 576 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 FGF16O43320 207 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CYTH3O43739 400 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 NIPSNAP2O75323 286 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ADAP1O75689 374 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 DHRS3O75911 302 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 MYO1DO94832 1006 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 SNAP29O95721 258 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IGKV1-39P01597 117 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IGKV2D-28P01615 120 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IGKV1D-39P04432 117 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 IL4P05112 153 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CDK1P06493 297 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CMC4P56277 68 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 C1QTNF8P60827 252 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ELF3P78545 371 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ZNF816Q0VGE8 651 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 BNIP2Q12982 314 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 EIF4EBP1Q13541 118 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 RAB31Q13636 194 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 EXOC3L4Q17RC7 722 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 Q499Y3 187 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 COX19Q49B96 90 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CLLU1OSQ5K130 101 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CLEC12AQ5QGZ9 265 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 MORN3Q6PF18 240 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 TPGS1Q6ZTW0 290 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 FAM231DQ6ZW35 169 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 PRNTQ86SH4 94 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ESR2Q92731 530 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CPNE4Q96A23 557 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 LRRC45Q96CN5 670 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 GPR82Q96P67 336 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 PITX2Q99697 317 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 MARVELD1Q9BSK0 173 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 LHX5Q9H2C1 402 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 ASB7Q9H672 318 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 SND1-IT1Q9HBX3 110 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 CYTL1Q9NRR1 136 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 C1orf109Q9NX04 203 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 TAS2R5Q9NYW4 299 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 KLF13Q9Y2Y9 288 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 INSIG2Q9Y5U4 225 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 PLXNB3Q9ULL4 1909 aa1.97□□□□□ -2.09
BRCA2-203ENST00000528762 KIF26AQ9ULI4 1882 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-203ENST00000528762 TMEM72A0PK05 275 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 C7orf66A4D0T2 115 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 TMEM150BA6NC51 233 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 RBFOX3A6NFN3 312 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 AQP9O43315 295 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 SYNGR1O43759 233 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 MPZL2O60487 215 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 MPZL1O95297 269 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 IGKV3-11P04433 115 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 IGKV5-2P06315 115 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 LIMS3P0CW19 117 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 LIMS4P0CW20 117 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 NELFEP18615 380 aaKnown RBP1.96□□□□□ -2.1
BRCA2-203ENST00000528762 M6PRP20645 277 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 PSMB9P28065 219 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 LGALS7P47929 136 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 TTPAP49638 278 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 SLC18A1P54219 525 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 PLTPP55058 493 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 CCL23P55773 120 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 TPM4P67936 248 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 EBI3Q14213 229 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 ZNF404Q494X3 552 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 ABCA11PQ4W5N1 156 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 KLHL12Q53G59 568 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 KCTD16Q68DU8 428 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 NIPAL1Q6NVV3 410 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 SSX7Q7RTT5 188 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 PDPNQ86YL7 162 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 CRLF3Q8IUI8 442 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 ITPRIPQ8IWB1 547 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 ACTL9Q8TC94 416 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 DYNC2LI1Q8TCX1 351 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 RTN4IP1Q8WWV3 396 aaPredicted RBP1.96□□□□□ -2.1
BRCA2-203ENST00000528762 DERL3Q96Q80 235 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 POTEKPQ9BYX7 375 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 TSGA10Q9BZW7 698 aa1.96□□□□□ -2.1
BRCA2-203ENST00000528762 API5Q9BZZ5 524 aaKnown RBP1.96□□□□□ -2.1
BRCA2-203ENST00000528762 HDHD2Q9H0R4 259 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms