RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SPIN3Q5JUX0 258 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR2G6Q5TZ20 316 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZNF529Q6P280 563 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR8H2Q8N162 312 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 C11orf42Q8N5U0 333 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 ASCC1Q8N9N2 400 aaKnown RBP9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR52N1Q8NH53 320 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 GPR148Q8TDV2 347 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 TSEN15Q8WW01 171 aaKnown RBP9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 GGHQ92820 318 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 DPAGT1Q9H3H5 408 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 HEXA-AS1Q9H8Q6 139 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 HMG20AQ9NP66 347 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 PLCXD1Q9NUJ7 323 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 CNOT2Q9NZN8 540 aaKnown RBP9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMEM82A0PJX8 343 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 EFCAB10A6NFE3 127 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 POM121CA8CG34 1229 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 SH2D1BO14796 132 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 SPRY1O43609 319 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 HAND1O96004 215 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 RBP4P02753 201 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 CRYBA1P05813 215 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 CD2P06729 351 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 MEF2CQ06413 473 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 SLC34A1Q06495 639 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 ST3GAL4Q11206 333 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 KISS1Q15726 138 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 MIDNQ504T8 468 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 HCP5Q6MZN7 132 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 CRIP3Q6Q6R5 217 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 C17orf107Q6ZR85 190 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 GDPD3Q7L5L3 318 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR4M1Q8NGD0 313 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 PPP1R35Q8TAP8 253 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 DYRK2Q92630 601 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 TFAP2CQ92754 450 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 CPNE2Q96FN4 548 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 RBFOX1Q9NWB1 397 aaKnown RBP9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZNF281Q9Y2X9 895 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
TRAPPC4-209ENST00000528230 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 A0A1B0GUS0 222 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 MEIOCA2RUB1 952 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 FAM181BA6NEQ2 426 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 H0YJX3 145 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 MAGEB3O15480 346 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ANGPTL7O43827 346 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ALDOBP05062 364 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 HCKP08631 526 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 GNAO1P09471 354 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 PRKACAP17612 351 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 RAB3AP20336 220 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 LMO1P25800 156 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ERP29P30040 261 aaKnown RBP9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 SAA4P35542 130 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 BMXP51813 675 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 DLX1P56177 255 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 DLX6P56179 175 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ERVFRD-1P60508 538 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ZP1P60852 638 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 KLRD1Q13241 179 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ZNF273Q14593 569 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 XAF1Q6GPH4 301 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 LAIR2Q6ISS4 152 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ZNF485Q8NCK3 441 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 PXT1Q8NFP0 134 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 OR52N4Q8NGI2 321 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 RGP1Q92546 391 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 RFT1Q96AA3 541 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 SMIM19Q96E16 107 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 SPACA5Q96QH8 159 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ZNF747Q9BV97 191 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 CHIAQ9BZP6 476 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 ZNRD1Q9P1U0 126 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 CLEC2DQ9UHP7 191 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 PSORS1C1Q9UIG5 152 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 PCDHGB5Q9Y5G0 923 aa9.89□□□□□ -0.83
TRAPPC4-209ENST00000528230 hADV38S2A0JD32 116 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 MGST3O14880 152 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 PSPNO60542 156 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 NDUFA7O95182 113 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 PAHP00439 452 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 IGHV4-59P01825 116 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 ZNF728P0DKX0 622 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 TMEM225BP0DP42 221 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 CCL3L1P16619 93 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 SOX2P48431 317 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 MTNR1BP49286 362 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 EDDM3BP56851 147 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 PRB3Q04118 309 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 GRK1Q15835 563 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 DMKNQ6E0U4 476 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 ELP2Q6IA86 826 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 RNF144BQ7Z419 303 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 BEND2Q8NDZ0 799 aa9.88□□□□□ -0.83
TRAPPC4-209ENST00000528230 OR5R1Q8NH85 324 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms