RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 RNF144BQ7Z419 303 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 LRRTM1Q86UE6 522 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 CD177Q8N6Q3 437 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 OR51T1Q8NGJ9 327 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 OR5D18Q8NGL1 313 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 OR5D13Q8NGL4 314 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 TBC1D15Q8TC07 691 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 EMG1Q92979 244 aaKnown RBP10.28□□□□□ -0.76
CCS-202ENST00000525435 RFT1Q96AA3 541 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 DACT3Q96B18 629 aaPredicted RBP10.28□□□□□ -0.76
CCS-202ENST00000525435 LPAR2Q9HBW0 351 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 RBFOX1Q9NWB1 397 aaKnown RBP10.28□□□□□ -0.76
CCS-202ENST00000525435 SLC25A10Q9UBX3 287 aaPredicted RBP10.28□□□□□ -0.76
CCS-202ENST00000525435 ZFHX3Q15911 3703 aa10.28□□□□□ -0.76
CCS-202ENST00000525435 H3BUI4 141 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 K7N7A8 449 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 CSTBP04080 98 aaKnown RBP10.27□□□□□ -0.77
CCS-202ENST00000525435 UBBP0CG47 229 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 ADRA2CP18825 462 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 DGUOKQ16854 277 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 NHLRC3Q5JS37 347 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 C1orf100Q5SVJ3 147 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 FAM27D1Q5T7N8 215 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 DCAF12L2Q5VW00 463 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 FAHD2BQ6P2I3 314 aaPredicted RBP10.27□□□□□ -0.77
CCS-202ENST00000525435 BTNL3Q6UXE8 466 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 GDPGP1Q6ZNW5 385 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 C1QL2Q7Z5L3 287 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 JAGN1Q8N5M9 183 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 FAM216BQ8N7L0 139 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 CHST4Q8NCG5 386 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 C8orf46Q8TAG6 207 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 PPP1R35Q8TAP8 253 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 FAHD2AQ96GK7 314 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 SNX22Q96L94 193 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 CNTD2Q9H8S5 307 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 CDC42EP3Q9UKI2 254 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 STUB1Q9UNE7 303 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 SSR3Q9UNL2 185 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 ING4Q9UNL4 249 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 GSTK1Q9Y2Q3 226 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 INSIG2Q9Y5U4 225 aa10.27□□□□□ -0.77
CCS-202ENST00000525435 SONP18583 2426 aaKnown RBP10.26□□□□□ -0.77
CCS-202ENST00000525435 TRBV23-1A0A0A0MS06 115 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 IGHV2-70DA0A0C4DH43 119 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 MAGEA13PA6NCF6 341 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 PDCD5O14737 125 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 ZNF737O75373 536 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 HAND1O96004 215 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 GTF2F2P13984 249 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 PRKACAP17612 351 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 HNF1AP20823 631 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 CALRP27797 417 aaKnown RBP10.26□□□□□ -0.77
CCS-202ENST00000525435 OR3A4PP47883 348 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 CAPZA1P52907 286 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 IKZF1Q13422 519 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 IL13RA2Q14627 380 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 CR1LQ2VPA4 569 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 TIMM50Q3ZCQ8 353 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 C1orf122Q6ZSJ8 110 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 BTN2A1Q7KYR7 527 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 LINC00596Q86U02 117 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 ZNRF1Q8ND25 227 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 NUDT16L1Q9BRJ7 211 aaKnown RBP10.26□□□□□ -0.77
CCS-202ENST00000525435 FAM192AQ9GZU8 254 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 ELL3Q9HB65 397 aaPredicted RBP10.26□□□□□ -0.77
CCS-202ENST00000525435 MMP26Q9NRE1 261 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 OR14J1Q9UGF5 321 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 RPUSD1Q9UJJ7 312 aaKnown RBP10.26□□□□□ -0.77
CCS-202ENST00000525435 MRPS28Q9Y2Q9 187 aaKnown RBP10.26□□□□□ -0.77
CCS-202ENST00000525435 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
CCS-202ENST00000525435 DEGS1O15121 323 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 SLC22A1O15245 554 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 FCN3O75636 299 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 CDRT1O95170 752 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 TK1P04183 234 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 CD36P16671 472 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 COL10A1Q03692 680 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 GLIPR1L1Q6UWM5 242 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 Q71RC1 249 aaPredicted RBP10.25□□□□□ -0.77
CCS-202ENST00000525435 TPRA1Q86W33 373 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 TMEM185AQ8NFB2 350 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 OR6M1Q8NGM8 313 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 ST8SIA4Q92187 359 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 DCTN5Q9BTE1 182 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 MRI1Q9BV20 369 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 IFT22Q9H7X7 185 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 EXOSC4Q9NPD3 245 aaKnown RBP10.25□□□□□ -0.77
CCS-202ENST00000525435 TXNL4BQ9NX01 149 aaKnown RBP10.25□□□□□ -0.77
CCS-202ENST00000525435 V9GY05 133 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 NF1P21359 2839 aa10.25□□□□□ -0.77
CCS-202ENST00000525435 DOCK11Q5JSL3 2073 aa10.24□□□□□ -0.77
CCS-202ENST00000525435 NAV3Q8IVL0 2385 aa10.24□□□□□ -0.77
CCS-202ENST00000525435 A0A1W2PPH5 198 aa10.24□□□□□ -0.77
CCS-202ENST00000525435 FUOMA2VDF0 154 aa10.24□□□□□ -0.77
CCS-202ENST00000525435 C22orf46C9J442 243 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms