RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 KCTD14Q9BQ13 255 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 DCTN5Q9BTE1 182 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 PAPOLGQ9BWT3 736 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 WDR13Q9H1Z4 485 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 MUC13Q9H3R2 512 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 ANKRD19PQ9H560 264 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 PPP1R3EQ9H7J1 279 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 SCPEP1Q9HB40 452 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 ELL3Q9HB65 397 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 MRPL22Q9NWU5 206 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 DNAJC27Q9NZQ0 273 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 KAAG1Q9UBP8 84 aa4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 PRPF19Q9UMS4 504 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-239ENST00000523685 TET2Q6N021 2002 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 AKR7A2O43488 359 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 XRCC2O43543 280 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 XPNPEP2O43895 674 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 TIPRLO75663 272 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 GADD45GO95257 159 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 GYPBP06028 91 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 CD28P10747 220 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 PSKH1P11801 424 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 COX7A1P24310 79 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 CHATP28329 748 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 HSD11B1P28845 292 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 HOXD3P31249 432 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 KIR2DS4P43632 304 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 GABRA2P47869 451 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 CX3CR1P49238 355 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 BMXP51813 675 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 UBE2E1P51965 193 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 EFNB2P52799 333 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 MED22Q15528 200 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 DGUOKQ16854 277 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 LRRC75BQ2VPJ9 315 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 VAX1Q5SQQ9 334 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 NCR3LG1Q68D85 454 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 METAP1DQ6UB28 335 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 CCDC121Q6ZUS5 278 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC16A9Q7RTY1 509 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 ARPINQ7Z6K5 226 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 ZDHHC21Q8IVQ6 265 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 LINC00471Q8N535 108 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 FAM86B1Q8N7N1 296 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 DRAXINQ8NBI3 349 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 TMEM185AQ8NFB2 350 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 OR4S1Q8NGB4 309 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNRF4Q8WWF5 429 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 RPL3LQ92901 407 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 TNFRSF14Q92956 283 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 PHF21AQ96BD5 680 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 SLAMF6Q96DU3 332 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 DUS3LQ96G46 650 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 OR5M11Q96RB7 305 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 MICU1Q9BPX6 476 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 MMP28Q9H239 520 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 EGLN3Q9H6Z9 239 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 METTL8Q9H825 291 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 RNPEPL1Q9HAU8 725 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 FGFR1OP2Q9NVK5 253 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 NECAP2Q9NVZ3 263 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 HAO2Q9NYQ3 351 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 KCNG2Q9UJ96 466 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 AP3M1Q9Y2T2 418 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 RHBDD3Q9Y3P4 386 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 MAB21L2Q9Y586 359 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 LYVE1Q9Y5Y7 322 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 NOTCH3Q9UM47 2321 aa4.24□□□□□ -1.73
CTNNA1-239ENST00000523685 ANXA2P2A6NMY6 339 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF850A8MQ14 1090 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 M0R1W7 72 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF593O00488 134 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 ARPC3O15145 178 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 CHST1O43916 411 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 GMNNO75496 209 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 TOMM40O96008 361 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 COX4I1P13073 169 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 IGLL1P15814 213 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 FMO3P31513 532 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 IFNGR2P38484 337 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 DDOSTP39656 456 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC15A1P46059 708 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 TGM4P49221 684 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 NUDT2P50583 147 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 RAB13P51153 203 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 SMIM11AP58511 58 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 FAM3AP98173 230 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 ACSM1Q08AH1 577 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 PRDX4Q13162 271 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 EIF2B1Q14232 305 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 HNF4GQ14541 408 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 DEFB121Q5J5C9 76 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 STUMQ69YW2 141 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 GLYATQ6IB77 296 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 CGB2Q6NT52 195 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 C11orf88Q6PI97 169 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 MKXQ8IYA7 352 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 RNF148Q8N7C7 305 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms