RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 A0A1W2PR64 198 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 A0A1W2PRV1 198 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ODF3BA8MYP8 253 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 E9PI62 339 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 KCNAB3O43448 404 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 PSPNO60542 156 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 HAND1O96004 215 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 IGKV1D-12P01611 117 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 RBP4P02753 201 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 MT-ND2P03891 347 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 CALCBP10092 127 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF20P17024 532 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 PRKACBP22694 351 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 EDDM3BP56851 147 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ACTA2P62736 377 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ACTG2P63267 376 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 MEF2CQ06413 473 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF146Q15072 292 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 LRRC75BQ2VPJ9 315 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ZBTB49Q6ZSB9 765 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 LHFPL2Q6ZUX7 228 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 Q8IYB0 196 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 C10orf67Q8IYJ2 551 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 FAM58AQ8N1B3 248 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 SYS1Q8N2H4 156 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 PQLC1Q8N2U9 271 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 OR13C3Q8NGS6 347 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 RFT1Q96AA3 541 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 OPALINQ96PE5 141 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 SPACA5Q96QH8 159 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ALG8Q9BVK2 526 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 MRPS18AQ9NVS2 196 aaKnown RBP10.03□□□□□ -0.8
VEGFA-223ENST00000523125 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 SNTNA6NMZ2 147 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 VGLL3A8MV65 326 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 MPZL2O60487 215 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 ZFPL1O95159 310 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 PRKACAP17612 351 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 POU3F4P49335 361 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 LY6EQ16553 131 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 TPRX1Q8N7U7 411 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 OR4S1Q8NGB4 309 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 APH1BQ8WW43 257 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 SPSB1Q96BD6 273 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 Q96MT0 163 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 CHST6Q9GZX3 395 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 HMG20AQ9NP66 347 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 FBLN5Q9UBX5 448 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
VEGFA-223ENST00000523125 EBAG9O00559 213 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 TIMM23O14925 209 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 CHST1O43916 411 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 WBP4O75554 376 aaKnown RBP10.01□□□□□ -0.81
VEGFA-223ENST00000523125 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
VEGFA-223ENST00000523125 CYB5AP00167 134 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 GABRR1P24046 479 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 KIR2DS4P43632 304 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 OR3A1P47881 315 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 LGALS4P56470 323 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 RAB40BQ12829 278 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 EDDM3AQ14507 147 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 GRK1Q15835 563 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 SMN1Q16637 294 aaKnown RBP10.01□□□□□ -0.81
VEGFA-223ENST00000523125 SPIN3Q5JUX0 258 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 ZNF626Q68DY1 528 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 ZNF676Q8N7Q3 588 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 OR13C9Q8NGT0 318 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 ZNF714Q96N38 554 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 PDCD1LG2Q9BQ51 273 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 TCF7L1Q9HCS4 588 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 SIGLEC9Q9Y336 463 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 LINC00312Q9Y6C7 94 aa10.01□□□□□ -0.81
VEGFA-223ENST00000523125 hADV38S2A0JD32 116 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 M0QZ24 198 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 MGST3O14880 152 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 MMP23AO75900 390 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 KDM4BO94953 1096 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 ALX3O95076 343 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 OR2H2O95918 312 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 ARG1P05089 322 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 LIMS3P0CW19 117 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 LIMS4P0CW20 117 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 LMO1P25800 156 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 PEX2P28328 305 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 ERP29P30040 261 aaKnown RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 RAB13P51153 203 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 EFNB2P52799 333 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 SNU13P55769 128 aaKnown RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 CCBE1Q6UXH8 406 aaPredicted RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 SAXO1Q8IYX7 474 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 PARP16Q8N5Y8 322 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 OR5D18Q8NGL1 313 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 OR13D1Q8NGV5 346 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 MALSU1Q96EH3 234 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 MRPL48Q96GC5 212 aaKnown RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 JAM3Q9BX67 310 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 COMMD4Q9H0A8 199 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms