RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PIFOQ8TCI5 191 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 PELI1Q96FA3 418 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 SPACA5Q96QH8 159 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 HHLA2Q9UM44 414 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 CHST1O43916 411 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 PSPNO60542 156 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 OCM2P0CE71 109 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 OCMP0CE72 109 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-209ENST00000522243 IGHV1-8P0DP01 117 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 PRKACBP22694 351 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 PEX2P28328 305 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 DYNC1I2Q13409 638 aaKnown RBP16.76■□□□□ 0.27
SDCBP-209ENST00000522243 ALKBH1Q13686 389 aaKnown RBP16.76■□□□□ 0.27
SDCBP-209ENST00000522243 FAM189A2Q15884 450 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 AANATQ16613 207 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 LDLRAD2Q5SZI1 272 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 LHFPL2Q6ZUX7 228 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 UTS2BQ765I0 119 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 Q8IYB0 196 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 OR4S1Q8NGB4 309 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 OR13C3Q8NGS6 347 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 ZNF714Q96N38 554 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 OPALINQ96PE5 141 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 NKX3-1Q99801 234 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-209ENST00000522243 AMBNQ9NP70 447 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 MYRFQ9Y2G1 1151 aa16.76■□□□□ 0.27
SDCBP-209ENST00000522243 TET2Q6N021 2002 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-209ENST00000522243 TRBV2A0A0J9YWF9 115 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 hADV38S2A0JD32 116 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 MEGF11A6BM72 1044 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 SNTNA6NMZ2 147 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 OR4C45A6NMZ5 311 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 ODF3BA8MYP8 253 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 SIRPB1O00241 398 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 GABRB1P18505 474 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 KIR2DS4P43632 304 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 CCR9P51686 369 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 SSX2Q16385 188 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 ZNF626Q68DY1 528 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 ENTHD1Q8IYW4 607 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 ZNF676Q8N7Q3 588 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 OR5D18Q8NGL1 313 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 OR4C13Q8NGP0 309 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 OR13C9Q8NGT0 318 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 FAM110DQ8TAY7 271 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-209ENST00000522243 SLC29A1Q99808 456 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 ALG8Q9BVK2 526 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 ISG20L2Q9H9L3 353 aaKnown RBP16.75■□□□□ 0.27
SDCBP-209ENST00000522243 FOXJ3Q9UPW0 622 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 GSTK1Q9Y2Q3 226 aa16.75■□□□□ 0.27
SDCBP-209ENST00000522243 PKD1L1Q8TDX9 2849 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 IGKV1-12A0A0C4DH73 117 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 IGKV1D-12P01611 117 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 DBTP11182 482 aaKnown RBP16.74■□□□□ 0.27
SDCBP-209ENST00000522243 EFNB2P52799 333 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 ACTA2P62736 377 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 ACTG2P63267 376 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 MEF2CQ06413 473 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-209ENST00000522243 PDZK1IP1Q13113 114 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 C11orf44Q8N8P7 122 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 SPSB1Q96BD6 273 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 C9orf16Q9BUW7 83 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 RAB18Q9NP72 206 aa16.74■□□□□ 0.27
SDCBP-209ENST00000522243 TBL2Q9Y4P3 447 aaKnown RBP16.74■□□□□ 0.27
SDCBP-209ENST00000522243 RBP4P02753 201 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 JUNBP17275 347 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-209ENST00000522243 OR3A1P47881 315 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 GALEQ14376 348 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 ZNF146Q15072 292 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 PDLIM3Q53GG5 364 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-209ENST00000522243 CCBE1Q6UXH8 406 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-209ENST00000522243 OR11H6Q8NGC7 330 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 OR2T6Q8NHC8 308 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 NPFFR1Q9GZQ6 430 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 SEBOXQ9HB31 216 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-209ENST00000522243 NEK6Q9HC98 313 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 S100A14Q9HCY8 104 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 HMG20AQ9NP66 347 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 ABCB10Q9NRK6 738 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 GLS2Q9UI32 602 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 LINC00312Q9Y6C7 94 aa16.73■□□□□ 0.27
SDCBP-209ENST00000522243 MMP23AO75900 390 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 HERPUD1Q15011 391 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 ZBTB49Q6ZSB9 765 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 Q6ZTK2 550 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 TRAPPC6BQ86SZ2 158 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 TMEM219Q86XT9 240 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 KLHDC1Q8N7A1 406 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 RHOXF1Q8NHV9 184 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 MALSU1Q96EH3 234 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 MRPL48Q96GC5 212 aaKnown RBP16.72■□□□□ 0.27
SDCBP-209ENST00000522243 ZCCHC4Q9H5U6 513 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 RANBP3Q9H6Z4 567 aaPredicted RBP16.72■□□□□ 0.27
SDCBP-209ENST00000522243 EXOSC4Q9NPD3 245 aaKnown RBP16.72■□□□□ 0.27
SDCBP-209ENST00000522243 TCF19Q9Y242 345 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 HILPDAQ9Y5L2 63 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 SESN1Q9Y6P5 492 aa16.72■□□□□ 0.27
SDCBP-209ENST00000522243 LOC100130705A0A1B0GUX0 176 aa16.71■□□□□ 0.27
SDCBP-209ENST00000522243 VGLL3A8MV65 326 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms