RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 OR4M2Q8NGB6 313 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 CCL17Q92583 94 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 RDH5Q92781 318 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 PSMG3-AS1Q96PY0 264 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 CCDC32Q9BV29 185 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 SRRQ9GZT4 340 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 DLL4Q9NR61 685 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 TMEM106BQ9NUM4 274 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 TREM2Q9NZC2 230 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 NLKQ9UBE8 527 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 OR14J1Q9UGF5 321 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 PLEKHA6Q9Y2H5 1048 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 TRAV38-1A0A0B4J264 116 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 TMEM235A6NFC5 223 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 OOEPA6NGQ2 149 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 SERPINE3A8MV23 424 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 C3orf80F5H4A9 247 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 TMEM178BH3BS89 294 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 J3QRK9 145 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 LGALS8O00214 317 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 MFNGO00587 321 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 SH2D1BO14796 132 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 DEGS1O15121 323 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 CTDSPLO15194 276 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 HAND1O96004 215 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 FUT3P21217 361 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 COL8A1P27658 744 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 CHATP28329 748 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 PTH2RP49190 550 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 INPP1P49441 399 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 PPP5CP53041 499 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 GNG2P59768 71 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 MRPS11P82912 194 aaKnown RBP7.53□□□□□ -1.2
CSMD1-208ENST00000520561 MRPS15P82914 257 aaKnown RBP7.53□□□□□ -1.2
CSMD1-208ENST00000520561 SCN1BQ07699 218 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 KCNJ8Q15842 424 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 MICBQ29980 383 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 ZNF260Q3ZCT1 412 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 RNASE12Q5GAN4 147 aaKnown RBP7.53□□□□□ -1.2
CSMD1-208ENST00000520561 TRIQKQ629K1 86 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 ZNF295-AS1Q8N0V1 137 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 Q8N402 240 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 MARVELD3Q96A59 401 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 ARHGAP5-AS1Q96IT6 56 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 SOSTQ9BQB4 213 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 WDR13Q9H1Z4 485 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 AUNIPQ9H7T9 357 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 IFT22Q9H7X7 185 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 PLEKHJ1Q9NW61 149 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 HSF4Q9ULV5 492 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 WIPI2Q9Y4P8 454 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 CACNG2Q9Y698 323 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
CSMD1-208ENST00000520561 PKDREJQ9NTG1 2253 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PPIAL4EA0A075B759 164 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 IGHV3OR15-7A0A075B7D8 119 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 RFPL4AA6NLU0 287 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 OR2AT4A6NND4 320 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 FOXI3A8MTJ6 420 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 MCRIP1C9JLW8 97 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PPIAL4DF5H284 164 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 RFPL4AL1F8VTS6 287 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 GABARAPH6UMI1 98 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 SIRPB1O00241 398 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 SULT1C2O00338 296 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 OR2H2O95918 312 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 LHBP01229 141 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 HLA-DQB1P01920 261 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 CD3GP09693 182 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PPIAL4FP0DN26 164 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 DAOP14920 347 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 MUC1P15941 1255 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 GNB3P16520 340 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 DUSP1P28562 367 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PRSS3P35030 304 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 GABRA2P47869 451 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 EFNA4P52798 201 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 ARFRP1Q13795 201 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 RBM39Q14498 530 aaKnown RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PDCD1Q15116 288 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 CARTPTQ16568 116 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 CDNFQ49AH0 187 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PAN3Q58A45 887 aaKnown RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PLAC9Q5JTB6 97 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 FAM201AQ5SY85 155 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 TEX36Q5VZQ5 186 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 ZNF787Q6DD87 383 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 SFRP4Q6FHJ7 346 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 SIGIRRQ6IA17 410 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 C16orf87Q6PH81 154 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 C6orf201Q7Z4U5 140 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PEG10Q86TG7 708 aaKnown RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 TGIF2LYQ8IUE0 185 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 OR8H2Q8N162 312 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 C19orf18Q8NEA5 215 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms