RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TMEM42Q69YG0 159 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 HBMQ6B0K9 141 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 LINC00336Q6ZUF6 198 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM144Q7Z5S9 345 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM25Q86YD3 366 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 VKORC1L1Q8N0U8 176 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CA13Q8N1Q1 262 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 EID2Q8N6I1 236 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 METTL13Q8N6R0 699 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ATP6V0D2Q8N8Y2 350 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 C20orf203Q8NBC4 194 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 SUMF2Q8NBJ7 301 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF740Q8NDX6 193 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 DUSP18Q8NEJ0 188 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 OR1M1Q8NGA1 313 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 OR4D9Q8NGE8 314 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 OR51S1Q8NGJ8 323 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 OR10X1Q8NGY0 326 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 OR6K3Q8NGY3 331 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 STOML3Q8TAV4 291 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 SLC7A13Q8TCU3 470 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RAB8BQ92930 207 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TCEAL3Q969E4 200 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FLYWCH2Q96CP2 140 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RCN3Q96D15 328 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 HSFY1Q96LI6 401 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RBP7Q96R05 134 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 PFDN5Q99471 154 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RNF2Q99496 336 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM208Q9BTX3 173 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM109Q9BVC6 243 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 NUDT9Q9BW91 350 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 NXF2Q9GZY0 626 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TXNIPQ9H3M7 391 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CLMPQ9H6B4 373 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 SLC25A22Q9H936 323 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 NMNAT1Q9HAN9 279 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 IFT46Q9NQC8 304 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 AIG1Q9NVV5 245 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 COMMD9Q9P000 198 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 VPS29Q9UBQ0 182 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FBXO5Q9UKT4 447 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 NDRG2Q9UN36 371 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RCL1Q9Y2P8 373 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ACOT9Q9Y305 439 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 SNX24Q9Y343 169 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 LSM5Q9Y4Y9 91 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 IFT172Q9UG01 1749 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM131LA2VDJ0 1609 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 EHBP1L1Q8N3D4 1523 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 PDE4DIPQ5VU43 2346 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FMN1Q68DA7 1419 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ARHGAP35Q9NRY4 1499 aa2.4□□□□□ -2.02
VPS13B-207ENST00000518569 IGHV3OR16-13A0A075B7E8 117 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 IGKV6D-21A0A0A0MT36 114 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 A0A0G2JMP0 313 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 KIR2DL5BA0A0G2JN68 375 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 KIR2DL5BA0A0G2JPC4 375 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TCRBV9S1A1TA0A576 114 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR6C6A6NF89 314 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR5B21A6NL26 309 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TRDCB7Z8K6 153 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 PPP5D1E7EU14 171 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TCAPO15273 167 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 FABP7O15540 132 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 SYNGR1O43759 233 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TPST1O60507 370 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 NPIPB7O75200 414 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 UGT2B11O75310 529 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR7A10O76100 309 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 MPZL1O95297 269 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 CNIH1O95406 144 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TDP2O95551 362 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 CD5P06127 495 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 HOXC4P09017 264 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TACSTD2P09758 323 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR10J4P0C629 311 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR8U9P0C7N5 309 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 LIMS3P0CW19 117 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 LIMS4P0CW20 117 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 C1GALT1C1LP0DN25 315 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 SLC2A5P22732 501 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 LOXP28300 417 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 S100GP29377 79 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 HTR1FP30939 366 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 HRH1P35367 487 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 ARL2P36404 184 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 CTRLP40313 264 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 KIR2DS4P43632 304 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RPL5P46777 297 aaKnown RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 FGF8P55075 233 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 DLX6P56179 175 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RANP62826 216 aaKnown RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RPL31P62899 125 aaKnown RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 DEFA6Q01524 100 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TGFBR3Q03167 851 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 PRPSAP1Q14558 356 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 PMVKQ15126 192 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TRIP13Q15645 432 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 GABRA6Q16445 453 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms