RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PTGFRP43088 359 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 NPBWR1P48145 328 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 SSTP61278 116 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 RAC1P63000 192 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 RPL7L1Q6DKI1 246 aaKnown RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF561Q8N587 486 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 EXTL1Q92935 676 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 CTHRC1Q96CG8 243 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FAAP24Q9BTP7 215 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF426Q9BUY5 554 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 GHRLQ9UBU3 117 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FUT3P21217 361 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ADPRHL1Q8NDY3 354 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 RFESDQ8TAC1 157 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ESRP2Q9H6T0 727 aaKnown RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF107Q9UII5 783 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 MDC1Q14676 2089 aaKnown RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 CST7O76096 145 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZBTB25P24278 435 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 CALCRP30988 508 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 THBS4P35443 961 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 GPR12P47775 334 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 GABRA4P48169 554 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF766Q5HY98 468 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 DRAM2Q6UX65 266 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 TMEM123Q8N131 208 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 D2HGDHQ8N465 521 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 EIF4E3Q8N5X7 224 aaKnown RBP9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 NMES1Q9C002 83 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 CLEC1BQ9P126 229 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 CNIH1O95406 144 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 TMEM11P17152 192 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 FPR2P25090 351 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 DEGS2Q6QHC5 323 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 THNSL2Q86YJ6 484 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR2Y1Q8NGV0 311 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 BORCS7Q96B45 105 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 TLNRD1Q9H1K6 362 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 LPAR3Q9UBY5 353 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 FZR1Q9UM11 496 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 DEFA4P12838 97 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 NQO2P16083 231 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 SELEP16581 610 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 CA6P23280 308 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 CHRNB4P30926 498 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR3A4PP47883 348 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 FOXC1Q12948 553 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 CLEC18BQ6UXF7 455 aa9.56□□□□□ -0.88
PCDHGA1-202ENST00000517417 PLXNB3Q9ULL4 1909 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 hCG_1809904A0A1W2PP81 198 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 A0A1W2PPE2 198 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 A0A1W2PR64 198 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 A0A1W2PRV1 198 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 AQP7O14520 342 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 CD8AP01732 235 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR8U8P0C7N1 319 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 HIST1H1DP16402 221 aaKnown RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 NDUFA6P56556 154 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 RPS4XP62701 263 aaKnown RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF92Q03936 586 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 KIAA0141Q14154 515 aaPredicted RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 SLC22A18ASQ8N1D0 253 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZFP62Q8NB50 900 aaPredicted RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 C19orf12Q9NSK7 152 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 GNG13Q9P2W3 67 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 AK3Q9UIJ7 227 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 CACNA1DQ01668 2161 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 TRAV17A0A0B4J275 112 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 M0R296 226 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 DHRS3O75911 302 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 LYZL6O75951 148 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 TXNDC12O95881 172 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 BGLAPP02818 100 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 HLA-DOBP13765 273 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 SSPNQ14714 243 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 BATFQ16520 125 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 RPS4Y2Q8TD47 263 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 SPSB1Q96BD6 273 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 UHRF2Q96PU4 802 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 TUBG2Q9NRH3 451 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 ANAPC1Q9H1A4 1944 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 MTCL1Q9Y4B5 1905 aaKnown RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 EPOPA6NHQ4 379 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 SPRY3O43610 288 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 MEOX1P50221 254 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 DVL1P1P54792 670 aaPredicted RBP9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 FABP9Q0Z7S8 132 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 RAB35Q15286 201 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 HES3Q5TGS1 186 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 CARFQ8N187 725 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 A0A1B0GTQ1 180 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 CST4P01036 141 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 KRASP01116 189 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 ACKR3P25106 362 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 ASCL1P50553 236 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 DEFA6Q01524 100 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms