RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 BPIFB6Q8NFQ5 453 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 COMMD4Q9H0A8 199 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 METTL8Q9H825 291 aaKnown RBP9.39□□□□□ -0.91
VCAN-212ENST00000515397 NOX4Q9NPH5 578 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 DHDHQ9UQ10 334 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 TRBV23-1A0A0A0MS06 115 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 TMEM212A6NML5 194 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 PSPNO60542 156 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 CYB5AP00167 134 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 TMEM225BP0DP42 221 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 DCKP27707 260 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 CAPGP40121 348 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 IER3P46695 156 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 BMXP51813 675 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 UBE2E1P51965 193 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 ST3GAL4Q11206 333 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 FOXL1Q12952 345 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 DOC2BQ14184 412 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 TAF9Q16594 264 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 METAP1DQ6UB28 335 aaPredicted RBP9.38□□□□□ -0.91
VCAN-212ENST00000515397 C1orf122Q6ZSJ8 110 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 LHFPL2Q6ZUX7 228 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 PACRGLQ8N7B6 248 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 OR4S1Q8NGB4 309 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 SSMEM1Q8WWF3 244 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 TMEM80Q96HE8 168 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 NR1H4Q96RI1 486 aaPredicted RBP9.38□□□□□ -0.91
VCAN-212ENST00000515397 UNKLQ9H9P5 680 aaKnown RBP9.38□□□□□ -0.91
VCAN-212ENST00000515397 BABAM2Q9NXR7 383 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 TAS2R4Q9NYW5 299 aa9.38□□□□□ -0.91
VCAN-212ENST00000515397 CAB39Q9Y376 341 aaPredicted RBP9.38□□□□□ -0.91
VCAN-212ENST00000515397 A0A1W2PPK0 400 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 CASQ2O14958 399 aaPredicted RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 SULT1B1O43704 296 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 GPR137BO60478 399 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 CRYBA1P05813 215 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 CCDC159P0C7I6 412 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 C21orf33P30042 268 aaPredicted RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 DLX6P56179 175 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 CDK5R1Q15078 307 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 GRK1Q15835 563 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 PLA1AQ53H76 456 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 RPL22L1Q6P5R6 122 aaKnown RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 TMPRSS11AQ6ZMR5 421 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 GDPD3Q7L5L3 318 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 SERPINA12Q8IW75 414 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 C8orf59Q8N0T1 100 aaPredicted RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 SETD9Q8NE22 299 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 OR5D14Q8NGL3 314 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 OR10K1Q8NGX5 313 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 TBC1D15Q8TC07 691 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 NRG4Q8WWG1 115 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 SPSB1Q96BD6 273 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 SNX22Q96L94 193 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 HMG20AQ9NP66 347 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 DIMT1Q9UNQ2 313 aaKnown RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 EXOSC1Q9Y3B2 195 aaKnown RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 SF3B6Q9Y3B4 125 aaKnown RBP9.37□□□□□ -0.91
VCAN-212ENST00000515397 TRRAPQ9Y4A5 3859 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 MGAM2Q2M2H8 2515 aa9.37□□□□□ -0.91
VCAN-212ENST00000515397 OGG1O15527 345 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 MMP23AO75900 390 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 OR2H2O95918 312 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 PAHP00439 452 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 MT-ND2P03891 347 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 FBP1P09467 338 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 MYL12AP19105 171 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 ZP1P60852 638 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 KISS1Q15726 138 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 LY6EQ16553 131 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 KIAA2026Q5HYC2 2103 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 NCR3LG1Q68D85 454 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 BAIAP2L2Q6UXY1 529 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 AHSA2Q719I0 299 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 TCF23Q7RTU1 214 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 OR8H2Q8N162 312 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 PARP16Q8N5Y8 322 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 OR5D13Q8NGL4 314 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 GPR148Q8TDV2 347 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 SGCDQ92629 289 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 GHSRQ92847 366 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 MYCBPQ99417 103 aaPredicted RBP9.36□□□□□ -0.91
VCAN-212ENST00000515397 GPER1Q99527 375 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 JAM3Q9BX67 310 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 FAM234AQ9H0X4 552 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 PPA2Q9H2U2 334 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 ZMAT3Q9HA38 289 aaKnown RBP9.36□□□□□ -0.91
VCAN-212ENST00000515397 CHCHD3Q9NX63 227 aaKnown RBP9.36□□□□□ -0.91
VCAN-212ENST00000515397 ZNF581Q9P0T4 197 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 ZNRD1Q9P1U0 126 aa9.36□□□□□ -0.91
VCAN-212ENST00000515397 PTGES3LE9PB15 166 aa9.35□□□□□ -0.91
VCAN-212ENST00000515397 HSPB6O14558 160 aa9.35□□□□□ -0.91
VCAN-212ENST00000515397 SH2D1BO14796 132 aa9.35□□□□□ -0.91
VCAN-212ENST00000515397 KDM4BO94953 1096 aa9.35□□□□□ -0.91
VCAN-212ENST00000515397 CDRT1O95170 752 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms