RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 OR13C9Q8NGT0 318 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 OR10AC1Q8NH08 325 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 TRMT10AQ8TBZ6 339 aaKnown RBP6.79□□□□□ -1.32
NEDD4-210ENST00000513957 UPRTQ96BW1 309 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 PGLYRP3Q96LB9 341 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 C16orf92Q96LL3 132 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 JMJD8Q96S16 334 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 WDR13Q9H1Z4 485 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 CDIP1Q9H305 208 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 ISYNA1Q9NPH2 558 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 TMEM138Q9NPI0 162 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 MMP26Q9NRE1 261 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 SLC25A10Q9UBX3 287 aaPredicted RBP6.79□□□□□ -1.32
NEDD4-210ENST00000513957 CLEC2DQ9UHP7 191 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 GLS2Q9UI32 602 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 RPUSD1Q9UJJ7 312 aaKnown RBP6.79□□□□□ -1.32
NEDD4-210ENST00000513957 RRP15Q9Y3B9 282 aaKnown RBP6.79□□□□□ -1.32
NEDD4-210ENST00000513957 KPTNQ9Y664 436 aa6.79□□□□□ -1.32
NEDD4-210ENST00000513957 CUBNO60494 3623 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 IGKV1D-17A0A075B6S4 117 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 IGKV1-27A0A075B6S5 117 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 IGHV3OR15-7A0A075B7D8 119 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 ZNF879B4DU55 563 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 C22orf46C9J442 243 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 DENRO43583 198 aaKnown RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 SYNGR1O43759 233 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 GPX5O75715 221 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 KDM4BO94953 1096 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 LALBAP00709 142 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 CHRM2P08172 466 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 HCKP08631 526 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 CLEC2LP0C7M8 214 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 FPR2P25090 351 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 PSMA1P25786 263 aaKnown RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 GABARAPL2P60520 117 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 PDZK1IP1Q13113 114 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 HNRNPA0Q13151 305 aaKnown RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 PMS2P11Q13670 270 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 ZNF146Q15072 292 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 SPHARQ15513 63 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 TRAM1Q15629 374 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 KISS1Q15726 138 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 TBCEQ15813 527 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 METTL11BQ5VVY1 283 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 XAF1Q6GPH4 301 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 METAP1DQ6UB28 335 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 C1orf229Q6ZS94 237 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 C9orf139Q6ZV77 190 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 SLC25A26Q70HW3 274 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 BTN2A1Q7KYR7 527 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 MS4A15Q8N5U1 240 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 LY6G5BQ8NDX9 201 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 PXT1Q8NFP0 134 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 NPRL2Q8WTW4 380 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 ZFAND2BQ8WV99 257 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 ST8SIA4Q92187 359 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 RGP1Q92546 391 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 GHSRQ92847 366 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 EMG1Q92979 244 aaKnown RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 CNBD2Q96M20 576 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 CCL13Q99616 98 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 DCTN5Q9BTE1 182 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 YTHDF1Q9BYJ9 559 aaKnown RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 CNTD2Q9H8S5 307 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 PCDHB16Q9NRJ7 776 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 PAK1IP1Q9NWT1 392 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-210ENST00000513957 MTCH1Q9NZJ7 389 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 OPN4Q9UHM6 478 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 NUP50Q9UKX7 468 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 FOXJ3Q9UPW0 622 aa6.78□□□□□ -1.32
NEDD4-210ENST00000513957 RFPL4AA6NLU0 287 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 PTGES3LE9PB15 166 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 RFPL4AL1F8VTS6 287 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 H3BSH0 61 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 M0R1W7 72 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 TCF21O43680 179 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 ZNF780AO75290 641 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 CELP19835 753 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 PRDX2P32119 198 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 RBMXP38159 391 aaKnown RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 RANBP1P43487 201 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 GABRA2P47869 451 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 POU3F4P49335 361 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 MLLT11Q13015 90 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 IKZF1Q13422 519 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 DOC2BQ14184 412 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 IRF3Q14653 427 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 DGUOKQ16854 277 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 DMRTC1Q5HYR2 192 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 ELP2Q6IA86 826 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 PRIMA1Q86XR5 153 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 ANGPTL5Q86XS5 388 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 FAM58AQ8N1B3 248 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 FAM216BQ8N7L0 139 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 RNF152Q8N8N0 203 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 CHST4Q8NCG5 386 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 TMEM185AQ8NFB2 350 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 OR5D13Q8NGL4 314 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms