RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 HMG20AQ9NP66 347 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 PCDHB16Q9NRJ7 776 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 RBFOX1Q9NWB1 397 aaKnown RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 KAAG1Q9UBP8 84 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 MIOXQ9UGB7 285 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 ACANP16112 2415 aa6.34□□□□□ -1.4
HMGXB3-204ENST00000513318 TEX15Q9BXT5 2789 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 IGKV1D-17A0A075B6S4 117 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 IGHV3OR15-7A0A075B7D8 119 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 IFITM5A6NNB3 132 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NOTOA8MTQ0 251 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 F5H0A9 414 aaPredicted RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 F8VVB4 439 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 F8VWA3 439 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 TMPRSS2O15393 492 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM127O75204 238 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 HTR3BO95264 441 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 BPNT1O95861 308 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 IL1AP01583 271 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 GYPAP02724 150 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 SFTPBP07988 381 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 PSG2P11465 335 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 GTF2F2P13984 249 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 PRKACAP17612 351 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 TGFBR1P36897 503 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NPBWR2P48146 333 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NPY4RP50391 375 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 TMBIM6P55061 237 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OR10A3P58181 314 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 VBP1P61758 197 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NCS1P62166 190 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 MXD1Q05195 221 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 IL13RA2Q14627 380 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF146Q15072 292 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 RAB11BQ15907 218 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 CTF1Q16619 201 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 SLC22A6Q4U2R8 563 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NHLRC3Q5JS37 347 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 ATPAF1Q5TC12 328 aaPredicted RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF788Q6ZQV5 615 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 C1QL2Q7Z5L3 287 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 LINC00596Q86U02 117 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NR2C2APQ86WQ0 139 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 CLVS1Q8IUQ0 354 aaPredicted RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 CROCCP3Q8IVE0 287 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OSR2Q8N2R0 312 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 DEFB108BQ8NET1 73 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OR8B3Q8NGG8 313 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OR51T1Q8NGJ9 327 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OR10K1Q8NGX5 313 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 SEH1LQ96EE3 360 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 MRPS24Q96EL2 167 aaKnown RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NEIL1Q96FI4 390 aaPredicted RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 C1orf147Q96MC9 270 aaPredicted RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OR8B2Q96RD0 313 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 NAA50Q9GZZ1 169 aaKnown RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF665Q9H7R5 613 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 SEBOXQ9HB31 216 aaPredicted RBP6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OR14J1Q9UGF5 321 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 STEAP1Q9UHE8 339 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 GLS2Q9UI32 602 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF222Q9UK12 451 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 ING4Q9UNL4 249 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 F8P00451 2351 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 CELSR1Q9NYQ6 3014 aa6.33□□□□□ -1.4
HMGXB3-204ENST00000513318 OTOGQ6ZRI0 2925 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 CSPG4Q6UVK1 2322 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 TLN2Q9Y4G6 2542 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 A0A0G2JK05 382 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 SMIM30A4D0T7 59 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 RFPL4AA6NLU0 287 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 RFPL4AL1F8VTS6 287 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 H7C1Q1 480 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 TNFRSF13BO14836 293 aaPredicted RBP6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 SIGLEC5O15389 551 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 ADAM20O43506 726 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 HAND1O96004 215 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 ARSBP15848 533 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 MGMTP16455 207 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 AMY2BP19961 511 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 GABRA2P47869 451 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 SERPINB10P48595 397 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 PITPNBP48739 271 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 SNU13P55769 128 aaKnown RBP6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 RBM11P57052 281 aaKnown RBP6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 LMO4P61968 165 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 IL13RA1P78552 427 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 BLMHQ13867 455 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 MPV17LQ2QL34 196 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 ESCO2Q56NI9 601 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 HES5Q5TA89 166 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 SFXN4Q6P4A7 337 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 LYPD2Q6UXB3 125 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 USP43Q70EL4 1123 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 OR2W3Q7Z3T1 314 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF561Q8N587 486 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 OR5T2Q8NGG2 359 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 KCNG3Q8TAE7 436 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 SLC25A28Q96A46 364 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms