RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 STARD4Q96DR4 205 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 SGTBQ96EQ0 304 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 SDSLQ96GA7 329 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 APOLD1Q96LR9 279 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 WDR92Q96MX6 357 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR52E6Q96RD3 313 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 GPX7Q96SL4 187 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 WACQ9BTA9 647 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 DPH7Q9BTV6 452 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 POLR2J2Q9GZM3 115 aaKnown RBP1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC22A4Q9H015 551 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 FXYD6Q9H0Q3 95 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 REEP4Q9H6H4 257 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 TUBA4BQ9H853 241 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 PLEKHF2Q9H8W4 249 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 CXorf21Q9HAI6 301 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 GPATCH2LQ9NWQ4 482 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 ANXA10Q9UJ72 324 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 POMT2Q9UKY4 750 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 B3GALT5Q9Y2C3 310 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 MRPS28Q9Y2Q9 187 aaKnown RBP1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 HDGFL3Q9Y3E1 203 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 TIMM10BQ9Y5J6 103 aa1.45□□□□□ -2.18
TRAPPC13-211ENST00000512009 TRBV23OR9-2A0A075B6M9 112 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TRBV5-5A0A0J9YX44 114 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TEX48A0A1B0GUV7 120 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PSMB11A5LHX3 300 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PGPA6NDG6 321 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 A6NIZ1 184 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD8B2A6NJW9 211 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 BBIP1A8MTZ0 92 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PRRT4C9JH25 899 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 C3orf80F5H4A9 247 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 M0R143 59 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 M0R233 179 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TLR4O00206 839 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF264O43296 627 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 EIF4EBP3O60516 100 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 VAMP5O95183 116 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 IGKV1D-16P01601 117 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SERPINA5P05154 406 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLEC2LP0C7M8 214 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PPP3CBP16298 524 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 GABRR1P24046 479 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD200P41217 278 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 HAAOP46952 286 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR3A1P47881 315 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 NR0B1P51843 470 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 NKX2-5P52952 324 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLDN20P56880 219 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLRN1P58418 232 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 RAP1BP61224 184 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 RAP1AP62834 184 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 ABHD18Q0P651 414 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TRA2AQ13595 282 aaKnown RBP eCLIP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 GPR68Q15743 365 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 RSPO4Q2I0M5 234 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 VMA21Q3ZAQ7 101 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 NRN1LQ496H8 165 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TEX30Q5JUR7 227 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SIRPB2Q5JXA9 342 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLEC6AQ6EIG7 209 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR10K2Q6IF99 312 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SPSB3Q6PJ21 355 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM205Q6UW68 189 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 MPZL3Q6UWV2 235 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 C1orf229Q6ZS94 237 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 BCDIN3DQ7Z5W3 292 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 EID2Q8N6I1 236 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 LINC00469Q8N7U9 141 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC35G3Q8N808 338 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR1K1Q8NGR3 316 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR13D1Q8NGV5 346 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CNIH3Q8TBE1 160 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 C4orf36Q96KX1 117 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PIP5K1AQ99755 562 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 HOPXQ9BPY8 73 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 NIPSNAP3BQ9BS92 247 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM147Q9BVK8 224 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC12A9Q9BXP2 914 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 GON7Q9BXV9 100 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 NKX6-2Q9C056 277 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 ATG10Q9H0Y0 220 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR10A5Q9H207 317 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR10A2Q9H208 303 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PIF1Q9H611 641 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 MRPS30Q9NP92 439 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 NRN1Q9NPD7 142 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SEMA4BQ9NPR2 832 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TAAR2Q9P1P5 351 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR52A1Q9UKL2 312 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PADI3Q9ULW8 664 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 CMAHPQ9Y471 501 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TRAV17A0A0B4J275 112 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC38A8A6NNN8 435 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 MS4A18H0YCH9 400 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 TNFRSF11BO00300 401 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 WNT9AO14904 365 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 DEGS1O15121 323 aa1.44□□□□□ -2.18
TRAPPC13-211ENST00000512009 PRKYO43930 277 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms