RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
USP38-202ENST00000510377 KLK2P20151 261 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 RAB1AP62820 205 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 RUNX1Q01196 453 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 ZNF610Q8N9Z0 462 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 POC1AQ8NBT0 407 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 SSX3Q99909 188 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 CARHSP1Q9Y2V2 147 aaKnown RBP13.06□□□□□ -0.32
USP38-202ENST00000510377 COL4A3Q01955 1670 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 SUMO3P55854 103 aaPredicted RBP13.05□□□□□ -0.32
USP38-202ENST00000510377 CDCP2Q5VXM1 449 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 ZNF100Q8IYN0 542 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 ZNF385AQ96PM9 386 aaKnown RBP13.05□□□□□ -0.32
USP38-202ENST00000510377 SLC39A9Q9NUM3 307 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 GJE1A6NN92 205 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 CLDN1O95832 211 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 SSR4P51571 173 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 SRPXP78539 464 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 SPANXN5Q5MJ07 72 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 OR5AS1Q8N127 324 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 ZNF611Q8N823 705 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 TMEM230Q96A57 120 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 A0A1W2PR80 420 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 NKX2-6A6NCS4 301 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 TUSC2O75896 110 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 GLB1P16278 677 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 FGF8P55075 233 aaPredicted RBP13.05□□□□□ -0.32
USP38-202ENST00000510377 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
USP38-202ENST00000510377 RARRES2Q99969 163 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 CABLES2Q9BTV7 478 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 P4HTMQ9NXG6 502 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 HDGFL3Q9Y3E1 203 aa13.05□□□□□ -0.32
USP38-202ENST00000510377 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 WDR1O75083 606 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 POU2F2P09086 479 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 ZNF705BP0CI00 300 aaPredicted RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 AADACP22760 399 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 GALNSP34059 522 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 HAAOP46952 286 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 ASPHD2Q6ICH7 369 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 RPS19BP1Q86WX3 136 aaKnown RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 PPP1R3CQ9UQK1 317 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 MRPL33O75394 65 aaKnown RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 CEACAM16Q2WEN9 425 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 C1orf87Q8N0U7 546 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 UBAC2Q8NBM4 344 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 OR6X1Q8NH79 312 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 EXTL1Q92935 676 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
USP38-202ENST00000510377 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 DEDDO75618 318 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 SYNGR4O95473 234 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 CCL2P13500 99 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 ZNF32P17041 273 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 BATFQ16520 125 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 FAM166AQ6J272 317 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 VASH2Q86V25 355 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 ZNF319Q9P2F9 582 aa13.04□□□□□ -0.32
USP38-202ENST00000510377 CCDC187A0A096LP49 1063 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 MEX3AA1L020 520 aaKnown RBP13.03□□□□□ -0.32
USP38-202ENST00000510377 MLF1P58340 268 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 ZNF528Q3MIS6 628 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 LIAT1Q6ZQX7 453 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 NINJ1Q92982 152 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 STRADBQ9C0K7 418 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
USP38-202ENST00000510377 IFI6P09912 130 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 B2MP61769 119 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 UBE2V2Q15819 145 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 LTC4SQ16873 150 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 ZNF787Q6DD87 383 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 COMMD1Q8N668 190 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 SLC35G3Q8N808 338 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 OR52M1Q8NGK5 317 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 SPSB2Q99619 263 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 LRRK1Q38SD2 2015 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 C3orf85A0A1B0GTC6 90 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 PRR19A6NJB7 356 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 H3BQ15 152 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 FBP1P09467 338 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 ATP6V0CP27449 155 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
USP38-202ENST00000510377 EWSR1Q01844 656 aaKnown RBP eCLIP13.03□□□□□ -0.32
USP38-202ENST00000510377 DMWDQ09019 674 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 TRAPPC2LQ9UL33 140 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 FGF16O43320 207 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 CCDC54Q8NEL0 328 aa13.03□□□□□ -0.32
USP38-202ENST00000510377 INTS12Q96CB8 462 aaKnown RBP13.03□□□□□ -0.32
USP38-202ENST00000510377 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
USP38-202ENST00000510377 MELTFP08582 738 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms