RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 IGKV1D-12P01611 117 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 MT-ND2P03891 347 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 ZNF728P0DKX0 622 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 CALCBP10092 127 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 COX7A1P24310 79 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 DUSP1P28562 367 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 POU3F4P49335 361 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 ZNF146Q15072 292 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 AANATQ16613 207 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 LDLRAD2Q5SZI1 272 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 ASPHD2Q6ICH7 369 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 TCF23Q7RTU1 214 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 LHFPL4Q7Z7J7 247 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 Q8IYB0 196 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 OR8H2Q8N162 312 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 FAM58AQ8N1B3 248 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 DYNAPQ8N1N2 210 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 SYS1Q8N2H4 156 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 Q96MT0 163 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 PPA2Q9H2U2 334 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 ERVK13-1Q9NX77 482 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 TRBV2A0A0J9YWF9 115 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 ZNF20P17024 532 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 EDDM3BP56851 147 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 ACTA2P62736 377 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 ACTG2P63267 376 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 MEF2CQ06413 473 aaPredicted RBP14.54□□□□□ -0.08
TPM3-220ENST00000509601 LY6EQ16553 131 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 BRICD5Q6PL45 260 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 LHFPL2Q6ZUX7 228 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 GDPD3Q7L5L3 318 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 TPRX1Q8N7U7 411 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 OR4S1Q8NGB4 309 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 OR52I1Q8NGK6 324 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 SPSB1Q96BD6 273 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 OPALINQ96PE5 141 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 HMG20AQ9NP66 347 aa14.54□□□□□ -0.08
TPM3-220ENST00000509601 ODF3BA8MYP8 253 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 FADS2O95864 444 aaKnown RBP14.53□□□□□ -0.08
TPM3-220ENST00000509601 RAB40BQ12829 278 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 LRRC75BQ2VPJ9 315 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 ZNF676Q8N7Q3 588 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 OR13C3Q8NGS6 347 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 RFT1Q96AA3 541 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 SPACA5Q96QH8 159 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 FBLN5Q9UBX5 448 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 KIAA2026Q5HYC2 2103 aa14.53□□□□□ -0.08
TPM3-220ENST00000509601 WBP4O75554 376 aaKnown RBP14.52□□□□□ -0.09
TPM3-220ENST00000509601 KDM4BO94953 1096 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 ALX3O95076 343 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 ZFPL1O95159 310 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 CYB5AP00167 134 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 RBP4P02753 201 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 IGHV1-8P0DP01 117 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 PRKACAP17612 351 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 PEX2P28328 305 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 LGALS4P56470 323 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 GRK1Q15835 563 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 OR11H6Q8NGC7 330 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 OR13C9Q8NGT0 318 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 MRPL48Q96GC5 212 aaKnown RBP14.52□□□□□ -0.09
TPM3-220ENST00000509601 ZNF714Q96N38 554 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 CHST6Q9GZX3 395 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 ZCCHC4Q9H5U6 513 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 INPP5EQ9NRR6 644 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 SIGLEC9Q9Y336 463 aa14.52□□□□□ -0.09
TPM3-220ENST00000509601 RPL36Q9Y3U8 105 aaKnown RBP14.52□□□□□ -0.09
TPM3-220ENST00000509601 hADV38S2A0JD32 116 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 KCNAB3O43448 404 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 BAG2O95816 211 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 LIMS3P0CW19 117 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 LIMS4P0CW20 117 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 GABRR1P24046 479 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 LMO1P25800 156 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 KIR2DS4P43632 304 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 OR3A1P47881 315 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 RAB13P51153 203 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 GTF2A1P52655 376 aaPredicted RBP14.51□□□□□ -0.09
TPM3-220ENST00000509601 SNU13P55769 128 aaKnown RBP14.51□□□□□ -0.09
TPM3-220ENST00000509601 EDDM3AQ14507 147 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 SMN1Q16637 294 aaKnown RBP14.51□□□□□ -0.09
TPM3-220ENST00000509601 KLHL22Q53GT1 634 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 SPIN3Q5JUX0 258 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 ZNF626Q68DY1 528 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 OR13D1Q8NGV5 346 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 MALSU1Q96EH3 234 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 MYCBPQ99417 103 aaPredicted RBP14.51□□□□□ -0.09
TPM3-220ENST00000509601 PDCD1LG2Q9BQ51 273 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 FGF20Q9NP95 211 aaPredicted RBP14.51□□□□□ -0.09
TPM3-220ENST00000509601 GSTK1Q9Y2Q3 226 aa14.51□□□□□ -0.09
TPM3-220ENST00000509601 VGLL3A8MV65 326 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 MGST3O14880 152 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 TIMM23O14925 209 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 MMP23AO75900 390 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 ARG1P05089 322 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 ERP29P30040 261 aaKnown RBP14.5□□□□□ -0.09
TPM3-220ENST00000509601 MRPL28Q13084 256 aaKnown RBP14.5□□□□□ -0.09
TPM3-220ENST00000509601 LPCAT4Q643R3 524 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 Q6P435 159 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 CCBE1Q6UXH8 406 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms