RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TSEN15Q8WW01 171 aaKnown RBP4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 GLMPQ8WWB7 406 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR5P3Q8WZ94 311 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM106AQ96A25 262 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 FGGYQ96C11 551 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 RNF170Q96K19 258 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ADAT1Q9BUB4 502 aaKnown RBP4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 SLITRK2Q9H156 845 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 TLNRD1Q9H1K6 362 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 CHODLQ9H9P2 273 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 FN3KRPQ9HA64 309 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 RHOFQ9HBH0 211 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 NDUFB11Q9NX14 153 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 MGAT4CQ9UBM8 478 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 FOXJ3Q9UPW0 622 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 GSTK1Q9Y2Q3 226 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 POLDIP2Q9Y2S7 368 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 SIRT4Q9Y6E7 314 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 TRBV5-7A0A0A0MS05 114 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 LRP5LA4QPB2 252 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 SULT1B1O43704 296 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 CYB5AP00167 134 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 MBPP02686 304 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 UCHL1P09936 223 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 IRF2P14316 349 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 DAOP14920 347 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 IGFBP3P17936 291 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 ANOS1P23352 680 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 GIFP27352 417 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 DUSP1P28562 367 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 FGF9P31371 208 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 TGFBR2P37173 567 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 PROK1P58294 105 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 CCL8P80075 99 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 MAB21L1Q13394 359 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 KCNJ8Q15842 424 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 NEDD8Q15843 81 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 TSTQ16762 297 aaKnown RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 HFEQ30201 348 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 HSD17B12Q53GQ0 312 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 RNASE12Q5GAN4 147 aaKnown RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM255AQ5JRV8 349 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 PLCXD3Q63HM9 321 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 CLEC2AQ6UVW9 174 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 MOB3CQ70IA8 216 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 Q8IYB0 196 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 NKAIN3Q8N8D7 197 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZFP41Q8N8Y5 198 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZSCAN4Q8NAM6 433 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR1M1Q8NGA1 313 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR51A4Q8NGJ6 313 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR10AC1Q8NH08 325 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 ITLN1Q8WWA0 313 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 RGP1Q92546 391 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 RAB1CQ92928 201 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 ADAT3Q96EY9 351 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 BORCS8Q96FH0 119 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 TIMD4Q96H15 378 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 DERL3Q96Q80 235 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR2V2Q96R30 315 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 PKIBQ9C010 78 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR51I2Q9H344 312 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 TPK1Q9H3S4 243 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 LIME1Q9H400 295 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM138Q9NPI0 162 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 PCDHB16Q9NRJ7 776 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 RASL12Q9NYN1 266 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 STUB1Q9UNE7 303 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 SSR3Q9UNL2 185 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 PPP1R3CQ9UQK1 317 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 COX11Q9Y6N1 276 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 PDZD2O15018 2839 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 MED13LQ71F56 2210 aa4.61□□□□□ -1.67
HMGB1P44-201ENST00000508597 ITPR3Q14573 2671 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 TRAV1-2A0A0B4J238 106 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PNMA8CA0A1B0GUJ8 204 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PQLC2LA1A4F0 135 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF732B4DXR9 585 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 CLDN25C9JDP6 229 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 F5H5P2 479 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 H0YL77 283 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 J3QT63 122 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 GABRPO00591 440 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PDCD5O14737 125 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 NDUFA2O43678 99 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 NOS1APO75052 506 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF780AO75290 641 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 IGHV4-39P01824 125 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 NHLRC4P0CG21 123 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SMIM18P0DKX4 95 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 CD37P11049 281 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SLC25A16P16260 332 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SRMP19623 302 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 MPZP25189 248 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 AZGP1P25311 298 aaKnown RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 BDKRB2P30411 391 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 MAGEB1P43366 347 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 RPL5P46777 297 aaKnown RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SOX2P48431 317 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms