RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CMTM4Q8IZR5 234 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 NPRL2Q8WTW4 380 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 SGCDQ92629 289 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM186Q96B77 213 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 CMTM3Q96MX0 182 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 FGF23Q9GZV9 251 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-205ENST00000506880 MTCH1Q9NZJ7 389 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 SCOCQ9UIL1 159 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 KPTNQ9Y664 436 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 V9GY05 133 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 TRAV8-7A0A075B6U6 113 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 A0A0A6YYH2 397 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 KIR2DS1A0A191URI9 304 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 A6NJ64 397 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 NOTOA8MTQ0 251 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 A8MV72 311 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF701M0R085 212 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 AIPO00170 330 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 MGST3O14880 152 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ADAM20O43506 726 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TPPPO94811 219 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 IL1AP01583 271 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 CD36P16671 472 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 RAB3BP20337 219 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 RAB6AP20340 208 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 CALRP27797 417 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 HTR2CP28335 458 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 PRDX2P32119 198 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 POU3F4P49335 361 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 RAB12Q6IQ22 244 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TRAT1Q6PIZ9 186 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF841Q6ZN19 808 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 LRRTM1Q86UE6 522 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ANGPTL5Q86XS5 388 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ANKRD13BQ86YJ7 626 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 OR8H2Q8N162 312 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 OSR2Q8N2R0 312 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 JAGN1Q8N5M9 183 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ZFP41Q8N8Y5 198 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 LY6G5BQ8NDX9 201 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 OR13F1Q8NGS4 319 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TRMT10AQ8TBZ6 339 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TNFAIP8L1Q8WVP5 186 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 RAB40AQ8WXH6 277 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 EMG1Q92979 244 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 URM1Q9BTM9 101 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TM2D1Q9BX74 207 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 RIMS4Q9H426 269 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 EXOSC4Q9NPD3 245 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 TXNL4BQ9NX01 149 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 SLC25A10Q9UBX3 287 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 OPN4Q9UHM6 478 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 MGAT4AQ9UM21 535 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 MRPS28Q9Y2Q9 187 aaKnown RBP7.05□□□□□ -1.28
PDGFC-205ENST00000506880 ETV7Q9Y603 341 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 CACNG2Q9Y698 323 aa7.05□□□□□ -1.28
PDGFC-205ENST00000506880 IGKV1D-17A0A075B6S4 117 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 LOC105371242A0A075B767 164 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 PNMA8CA0A1B0GUJ8 204 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RFPL4AA6NLU0 287 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 IFITM5A6NNB3 132 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 C3orf80F5H4A9 247 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RFPL4AL1F8VTS6 287 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 LYNX1G3V0Z9 82 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 SYNGR1O43759 233 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 LMX1BO60663 402 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF737O75373 536 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RHBDL1O75783 438 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 DIRAS3O95661 229 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 HAND1O96004 215 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 LYNX1P0DP58 116 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 CALCBP10092 127 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 ADRA2CP18825 462 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 ALDH3B2P48448 385 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 TMBIM6P55061 237 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 GP2P55259 537 aaKnown RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RBM11P57052 281 aaKnown RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RPS25P62851 125 aaKnown RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 PAX2Q02962 417 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 PAX8Q06710 450 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 BLMHQ13867 455 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 PDCD1Q15116 288 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 P2RY14Q15391 338 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 NEDD8Q15843 81 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 Q3ZCU0 254 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 SPRNQ5BIV9 151 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 NCR3LG1Q68D85 454 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 AWAT2Q6E213 333 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 CRIP3Q6Q6R5 217 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 CLEC9AQ6UXN8 241 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 SLC16A12Q6ZSM3 486 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF826PQ6ZT77 177 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 OR10A7Q8NGE5 316 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 FAM216AQ8WUB2 273 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RAB2BQ8WUD1 216 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 ACOT12Q8WYK0 555 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms