RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 MS4A7Q9GZW8 240 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-209ENST00000506630 CNTD2Q9H8S5 307 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 IL36RNQ9UBH0 155 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF69Q9UC07 566 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 RAB26Q9ULW5 256 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 IGKV1-12A0A0C4DH73 117 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 TRBV5-5A0A0J9YX44 114 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 RGS10O43665 173 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 ALX3O95076 343 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 IGKV1D-12P01611 117 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 MMP9P14780 707 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 CELP19835 753 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 SLC35A2P78381 396 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 DEFA6Q01524 100 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 COL10A1Q03692 680 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 FOXL1Q12952 345 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 DOC2BQ14184 412 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 MED22Q15528 200 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 Q499Y3 187 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 RNLSQ5VYX0 342 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 CMTM4Q8IZR5 234 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 BCL6BQ8N143 479 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-209ENST00000506630 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 C8orf46Q8TAG6 207 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 ORAI1Q96D31 301 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 OR14A2Q96R54 314 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF747Q9BV97 191 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 CDCA4Q9BXL8 241 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 CCDC90BQ9GZT6 254 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 FAM192AQ9GZU8 254 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 SIRPDQ9H106 197 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 PCDHGB5Q9Y5G0 923 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 KPTNQ9Y664 436 aa10.8□□□□□ -0.68
TCOF1-209ENST00000506630 TRBV23-1A0A0A0MS06 115 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 HAND1O96004 215 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 CHRM2P08172 466 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 TMEM225BP0DP42 221 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 CRHBPP24387 322 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 DUSP1P28562 367 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 ZP1P60852 638 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 RPS11P62280 158 aaKnown RBP eCLIP10.79□□□□□ -0.68
TCOF1-209ENST00000506630 BDH1Q02338 343 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 PDCD1Q15116 288 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 DDI2Q5TDH0 399 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 RUSC1-AS1Q66K80 236 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF529Q6P280 563 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 CRIP3Q6Q6R5 217 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 BRD3OSQ6XYD6 125 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 VMO1Q7Z5L0 202 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 OR52N4Q8NGI2 321 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 LHX4Q969G2 390 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 OR5M11Q96RB7 305 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF184Q99676 751 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-209ENST00000506630 NKX3-1Q99801 234 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-209ENST00000506630 SIRT7Q9NRC8 400 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 CKLFQ9UBR5 152 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 GLS2Q9UI32 602 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 GSTK1Q9Y2Q3 226 aa10.79□□□□□ -0.68
TCOF1-209ENST00000506630 A0A1W2PPK0 400 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 GABRPO00591 440 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 KDM4BO94953 1096 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 TK1P04183 234 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 EEF1B2P24534 225 aaKnown RBP10.78□□□□□ -0.68
TCOF1-209ENST00000506630 BDKRB2P30411 391 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 IRF3Q14653 427 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 SPHARQ15513 63 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 SPIN3Q5JUX0 258 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 RBM48Q5RL73 367 aaKnown RBP10.78□□□□□ -0.68
TCOF1-209ENST00000506630 PDZD9Q8IXQ8 264 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 SAXO1Q8IYX7 474 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 ZSCAN4Q8NAM6 433 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-209ENST00000506630 OR4M1Q8NGD0 313 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 TNFAIP8L1Q8WVP5 186 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 FAM234AQ9H0X4 552 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 Q9H521 79 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 DUSP21Q9H596 190 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 HMG20AQ9NP66 347 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 EXOSC4Q9NPD3 245 aaKnown RBP10.78□□□□□ -0.68
TCOF1-209ENST00000506630 TMEM138Q9NPI0 162 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 BLOC1S6Q9UL45 172 aa10.78□□□□□ -0.68
TCOF1-209ENST00000506630 LSM2Q9Y333 95 aaKnown RBP10.78□□□□□ -0.68
TCOF1-209ENST00000506630 CENPVL3A0A0U1RRI6 287 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 K7N7A8 449 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 SIRPB1O00241 398 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 ALDOBP05062 364 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 CD1AP06126 327 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 HSMCR30P0CW71 290 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 IGFBP3P17936 291 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-209ENST00000506630 FSTP19883 344 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 GABRR1P24046 479 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 ZNF93P35789 620 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-209ENST00000506630 OR3A4PP47883 348 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 EDDM3BP56851 147 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 RPL31P62899 125 aaKnown RBP10.77□□□□□ -0.69
TCOF1-209ENST00000506630 PRB3Q04118 309 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-209ENST00000506630 ACSM1Q08AH1 577 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 BLMHQ13867 455 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms