RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 HSF1Q00613 529 aa13.89□□□□□ -0.19
SCLT1-208ENST00000506368 KISS1Q15726 138 aa13.89□□□□□ -0.19
SCLT1-208ENST00000506368 OR8B12Q8NGG6 310 aa13.89□□□□□ -0.19
SCLT1-208ENST00000506368 OR10S1Q8NGN2 331 aa13.89□□□□□ -0.19
SCLT1-208ENST00000506368 OR1P1Q8NH06 330 aa13.89□□□□□ -0.19
SCLT1-208ENST00000506368 GPR119Q8TDV5 335 aa13.89□□□□□ -0.19
SCLT1-208ENST00000506368 MSI2Q96DH6 328 aaKnown RBP13.89□□□□□ -0.19
SCLT1-208ENST00000506368 JSRP1Q96MG2 331 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-208ENST00000506368 CISD1Q9NZ45 108 aaKnown RBP13.89□□□□□ -0.19
SCLT1-208ENST00000506368 A0A1W2PP11 408 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 PPP5D1E7EU14 171 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 CYTIPO60759 359 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 FREM3P0C091 2139 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 PDLIM4P50479 330 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 YPEL5P62699 121 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 GRB2P62993 217 aaKnown RBP13.88□□□□□ -0.19
SCLT1-208ENST00000506368 IQCJQ1A5X6 159 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 LYZL2Q7Z4W2 148 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 H1FOOQ8IZA3 346 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-208ENST00000506368 ZFP62Q8NB50 900 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-208ENST00000506368 PTPMT1Q8WUK0 201 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-208ENST00000506368 PP6455Q8WZ26 134 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 ST8SIA1Q92185 356 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 TSACCQ96A04 125 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-208ENST00000506368 SPACA5Q96QH8 159 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 CABLES2Q9BTV7 478 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 FAM60AQ9NP50 221 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 LYRM2Q9NU23 88 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-208ENST00000506368 OR14J1Q9UGF5 321 aa13.88□□□□□ -0.19
SCLT1-208ENST00000506368 DUXBA0A1W2PPF3 345 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 M0R143 59 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 AMBPP02760 352 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 IGKV3-11P04433 115 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 ZXDAP98168 799 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 GAGE1Q13065 139 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 SNX22Q96L94 193 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 KLHDC3Q9BQ90 382 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 PYGO2Q9BRQ0 406 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 OR8D2Q9GZM6 311 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 CHST11Q9NPF2 352 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 PLEKHJ1Q9NW61 149 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 RNF150Q9ULK6 438 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 PIGBOS1A0A0B4J2F0 54 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 A0A1W2PNV4 684 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 QDPRP09417 244 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 HLA-DOBP13765 273 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 ZNF17P17021 662 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 WASP42768 502 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 HLA-DQA1Q5Y7H0 255 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 NOXO1Q8NFA2 376 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 HAS2Q92819 552 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 SLC2A9Q9NRM0 540 aa13.87□□□□□ -0.19
SCLT1-208ENST00000506368 COL5A1P20908 1838 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-208ENST00000506368 A0A1B0GV50 99 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 CDC14CA4D256 554 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 PGA4P0DJD7 388 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 PGA5P0DJD9 388 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 PNLIPP16233 465 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 CTSSP25774 331 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 ZNF121P58317 390 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-208ENST00000506368 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 CMTM1Q8IZ96 169 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 OR52M1Q8NGK5 317 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 TSLPQ969D9 159 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 TMEM18Q96B42 140 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 P4HTMQ9NXG6 502 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 VPS13AQ96RL7 3174 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 IGKV1-9A0A0C4DH69 117 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 TMEM150CB9EJG8 249 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 PGA3P0DJD8 388 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 TMEM225BP0DP42 221 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 EPHA1P21709 976 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 NKX2-1P43699 371 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-208ENST00000506368 OR1D4P47884 311 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 CEBPGP53567 150 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 GABREP78334 506 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 POU3F1Q03052 451 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-208ENST00000506368 TLE3Q04726 772 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 KCNMB1Q16558 191 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 DEFB110Q30KQ9 67 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 ARL6IP6Q8N6S5 226 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 ZNF283Q8N7M2 679 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 RTN4RQ9BZR6 473 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 SDF2L1Q9HCN8 221 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 WNT16Q9UBV4 365 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 POLR1DQ9Y2S0 133 aa13.86□□□□□ -0.19
SCLT1-208ENST00000506368 IGKV1D-43A0A0B4J1Z2 117 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 IGLV3-1P01715 115 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 FUT3P21217 361 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 SUMO3P55854 103 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-208ENST00000506368 ERVFC1-1P60608 527 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 VAMP2P63027 116 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 PLCXD2Q0VAA5 305 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 PMS2P11Q13670 270 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 RAB35Q15286 201 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 FAM90A2PQ658T7 463 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 Q6ZSR3 168 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 LANCL3Q6ZV70 420 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 RNF144BQ7Z419 303 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms