RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ZNF587BE7ETH6 402 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 PHF1O43189 567 aaPredicted RBP6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 NME2P1O60361 137 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 TSPAN15O95858 294 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 CD5P06127 495 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 GDF1P27539 372 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 SRD5A2P31213 254 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 NPBWR2P48146 333 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 ASCL1P50553 236 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 Q0VFX4 171 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 MALLQ13021 153 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 PEA15Q15121 130 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 SLC23A3Q6PIS1 610 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 ETV3LQ6ZN32 361 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 C5orf24Q7Z6I8 188 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 CALHM1Q8IU99 346 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 IQCF2Q8IXL9 164 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 GLYATL2Q8WU03 294 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 SECTM1Q8WVN6 248 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 KIRREL1Q96J84 757 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 PLEKHA2Q9HB19 425 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 PARP11Q9NR21 331 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 NSG2Q9Y328 171 aa6.6□□□□□ -1.35
PPARGC1A-204ENST00000506055 MED19A0JLT2 244 aaPredicted RBP6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 NTN3O00634 580 aaPredicted RBP6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 GAPDHP04406 335 aaKnown RBP6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 CRYBA1P05813 215 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 CCL2P13500 99 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 RFC3P40938 356 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 PPT1P50897 306 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 RAB13P51153 203 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 FUT6P51993 359 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 CLDN15P56746 228 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 NHLH2Q02577 135 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 SRYQ05066 204 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 ZFP36L1Q07352 338 aaKnown RBP6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 IGSF11Q5DX21 431 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 FBXW12Q6X9E4 464 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 ASCL4Q6XD76 172 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 SLC25A26Q70HW3 274 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 ZNF611Q8N823 705 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 UBAC2Q8NBM4 344 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 KCNE4Q8WWG9 221 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 SYT3Q9BQG1 590 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 ZNF286AQ9HBT8 521 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 WFDC1Q9HC57 220 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 GPR35Q9HC97 309 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 FAM212BQ9NTI7 297 aaPredicted RBP6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 DEPPQ9NTK1 212 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 ZNF175Q9Y473 711 aa6.59□□□□□ -1.35
PPARGC1A-204ENST00000506055 A0A096LPE4 126 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 A0A1B0GV50 99 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 hCG_38984A0A1B0GV85 526 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 A0A1W2PPZ6 126 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 DNPH1O43598 174 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 C1QL1O75973 258 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 PDGFBP01127 241 aaPredicted RBP6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 PRH1P02810 166 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 SPP1P10451 314 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 EDN3P14138 238 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 AADACP22760 399 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 DVL1P1P54792 670 aaPredicted RBP6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 PCBD1P61457 104 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 HERV-K104P61576 105 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 MIDNQ504T8 468 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 ACER2Q5QJU3 275 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM42Q69YG0 159 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 Q6ZPA2 131 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 LIAT1Q6ZQX7 453 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR2V1Q8NHB1 315 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 NTNG2Q96CW9 530 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 GALNT14Q96FL9 552 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 TP53RKQ96S44 253 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 GPHA2Q96T91 129 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 SUCNR1Q9BXA5 334 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 EIF5A2Q9GZV4 153 aaKnown RBP6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.36
PPARGC1A-204ENST00000506055 BORCS7-ASMTA0A0B4J1R7 106 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF816-ZNF321PA0A0X1KG74 233 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 MEX3AA1L020 520 aaKnown RBP6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 HSPB6O14558 160 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 PDCD6O75340 191 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 FUT3P21217 361 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 DUSP1P28562 367 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 GLP1RP43220 463 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 RBM11P57052 281 aaKnown RBP6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 SPIN3Q5JUX0 258 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 SPINK14Q6IE38 97 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 PPP1R32Q7Z5V6 425 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 LGI3Q8N145 548 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 SLC35G3Q8N808 338 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 SUMF1Q8NBK3 374 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 HSD17B11Q8NBQ5 300 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 MSI2Q96DH6 328 aaKnown RBP6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 C18orf12Q96KH6 178 aa6.58□□□□□ -1.36
PPARGC1A-204ENST00000506055 RGCCQ9H4X1 137 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms