RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ING3Q9NXR8 418 aa5.45□□□□□ -1.54
NPIPB3-203ENST00000504841 IL36RNQ9UBH0 155 aa5.45□□□□□ -1.54
NPIPB3-203ENST00000504841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.45□□□□□ -1.54
NPIPB3-203ENST00000504841 SAMHD1Q9Y3Z3 626 aaKnown RBP5.45□□□□□ -1.54
NPIPB3-203ENST00000504841 LINC00312Q9Y6C7 94 aa5.45□□□□□ -1.54
NPIPB3-203ENST00000504841 TENM2Q9NT68 2774 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 COL7A1Q02388 2944 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 ARRDC5A6NEK1 342 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 PRR32B1ATL7 298 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SEC14L6B5MCN3 397 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 LOC110117498-PIK3R3F6TDL0 507 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SIRPB1O00241 398 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 TOR1AO14656 332 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 TTRP02766 147 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 CALCBP10092 127 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 CDK2P24941 298 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 MPZP25189 248 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 PEX2P28328 305 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 CHATP28329 748 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 GDNFP39905 211 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 GP2P55259 537 aaKnown RBP5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 P2RX3P56373 397 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 ERVK11-1P61568 191 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SLC35B1P78383 322 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 IL24Q13007 206 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 HES1Q14469 280 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 HLA-DRB5Q30154 266 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 TPTE2P1Q5T6R2 138 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SLX4IPQ5VYV7 408 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 CYP2R1Q6VVX0 501 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 ADAMTSL5Q6ZMM2 481 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 LCNL1Q6ZST4 164 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SLC25A26Q70HW3 274 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 EGFL6Q8IUX8 553 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SBSPONQ8IVN8 264 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 BBS1Q8NFJ9 593 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 OR10G2Q8NGC3 310 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 OR52N4Q8NGI2 321 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 OR56B4Q8NH76 319 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 CHPT1Q8WUD6 406 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 EDARADDQ8WWZ3 215 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 TOMM40LQ969M1 308 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 NIPSNAP1Q9BPW8 284 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 MROQ9BYG7 248 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 CCDC134Q9H6E4 229 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 REEP1Q9H902 201 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 ZNF286AQ9HBT8 521 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 ZFP57Q9NU63 452 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 ZNF256Q9Y2P7 627 aaPredicted RBP5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 SMAD5-AS1Q9Y6J3 95 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 DSCAML1Q8TD84 2053 aa5.44□□□□□ -1.54
NPIPB3-203ENST00000504841 TRGV10A0A0A0MS01 117 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 DLGAP1O14490 977 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 MAGEB4O15481 346 aaPredicted RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 PRODHO43272 600 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 PSPNO60542 156 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 IGLV3-1P01715 115 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 IGHV3-7P01780 117 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 RPLP1P05386 114 aaKnown RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 FAM106CPP0CH98 169 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 TMEM11P17152 192 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 NFYBP25208 207 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 SLC6A1P30531 599 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 CEACAM3P40198 252 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 POU3F4P49335 361 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 RIDAP52758 137 aaKnown RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 HMGA2P52926 109 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 BDH1Q02338 343 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 APOFQ13790 326 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 HNF4GQ14541 408 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 KPNB1Q14974 876 aaKnown RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 ODF4Q2M2E3 257 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 ZNF260Q3ZCT1 412 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 BCL2L15Q5TBC7 163 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 LCN1P1Q5VSP4 162 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 OR52W1Q6IF63 320 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 CCDC144NLQ6NUI1 221 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 PLEKHG7Q6ZR37 379 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 KRT74Q7RTS7 529 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 SLC35E3Q7Z769 313 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 CPOQ8IVL8 374 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 FOXRED2Q8IWF2 684 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 C5orf56Q8N8D9 126 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 RPEQ96AT9 228 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 CMTM5Q96DZ9 223 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 DGCR6LQ9BY27 220 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 PKIBQ9C010 78 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 GAL3ST2Q9H3Q3 398 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 PLEKHA1Q9HB21 404 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 RBFOX1Q9NWB1 397 aaKnown RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 MTCH1Q9NZJ7 389 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 NUFIP1Q9UHK0 495 aaKnown RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 HHLA2Q9UM44 414 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 COPS3Q9UNS2 423 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 UBE2J1Q9Y385 318 aaPredicted RBP5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
NPIPB3-203ENST00000504841 IGKV1-27A0A075B6S5 117 aa5.42□□□□□ -1.54
NPIPB3-203ENST00000504841 ACOD1A6NK06 481 aa5.42□□□□□ -1.54
NPIPB3-203ENST00000504841 BUB1B-PAK6H3BSN5 160 aa5.42□□□□□ -1.54
NPIPB3-203ENST00000504841 MGST3O14880 152 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms