RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SEC16AO15027 2179 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 DUXBA0A1W2PPF3 345 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 OR5H15A6NDH6 313 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 CNOT4O95628 575 aaKnown RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 GNB3P16520 340 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 MDH2P40926 338 aaKnown RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 NHLH2Q02577 135 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 GUCA2AQ02747 115 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 TBC1D28Q2M2D7 210 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 OR10K2Q6IF99 312 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ATRAIDQ6UW56 229 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 HSD17B13Q7Z5P4 300 aaPredicted RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 THNSL2Q86YJ6 484 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 STPG2Q8N412 459 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 RXFP4Q8TDU9 374 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 GTF3AQ92664 365 aaKnown RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 SARAFQ96BY9 339 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 GUCD1Q96NT3 240 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 SULT4A1Q9BR01 284 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 NICN1Q9BSH3 213 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 WNT5BQ9H1J7 359 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ANAPC10Q9UM13 185 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 FAM230AA0A1W2PPH8 454 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 CEACAM18A8MTB9 384 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 SHISA8B8ZZ34 492 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 OPN1LWP04000 364 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF728P0DKX0 622 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF32P17041 273 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 SDHBP21912 280 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ZBTB25P24278 435 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 UCP3P55916 312 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 PKIAP61925 76 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 PPIAP62937 165 aaKnown RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 C4orf17Q53FE4 359 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 OR5AS1Q8N127 324 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 KCNJ16Q9NPI9 418 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ANKRD10Q9NXR5 420 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 MEIS3P1A6NDR6 274 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 AP4M1O00189 453 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 PDCD6O75340 191 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 FGF7P21781 194 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 HLXQ14774 488 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 GUK1Q16774 197 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SLC25A24Q6NUK1 477 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 ZDHHC23Q8IYP9 409 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 OR5A2Q8NGI9 324 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 ABHD14BQ96IU4 210 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 GPR132Q9UNW8 380 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 RNF212BA8MTL3 300 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 MFNGO00587 321 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 TNFSF15O95150 251 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 CYB5R3P00387 301 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SP1P08047 785 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SELENOPP49908 381 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 QRFPP83859 136 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 WIPI1Q5MNZ9 446 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 CDCP2Q5VXM1 449 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 LRP11Q86VZ4 500 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SHISA5Q8N114 240 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 PIGCQ92535 297 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 FAM122AQ96E09 287 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF385AQ96PM9 386 aaKnown RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SLC25A31Q9H0C2 315 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 ESRP2Q9H6T0 727 aaKnown RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 OBP2BQ9NPH6 170 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 KLK13Q9UKR3 277 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 PUS1Q9Y606 427 aaKnown RBP eCLIP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 HEATR5AQ86XA9 2040 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 TRAV17A0A0B4J275 112 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SYNGR3O43761 229 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 JTBO76095 146 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 YIF1AO95070 293 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 CFDP00746 253 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 IGLV3-1P01715 115 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 TMIGD3P0DMS9 266 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 MPGP29372 298 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 CLN3Q13286 438 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 COL9A2Q14055 689 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 HMGN3Q15651 99 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SFRP5Q5T4F7 317 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 LAMTOR1Q6IAA8 161 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 COMMD1Q8N668 190 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 NUDCD2Q8WVJ2 157 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 NTNG2Q96CW9 530 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 RTL8AQ9BWD3 113 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 VSTM5A8MXK1 200 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 VSIG10L2P0DP72 767 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 FAHP16930 419 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 GABRR1P24046 479 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 SOX8P57073 446 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 S100A10P60903 97 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 UBE2KP61086 200 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 FOXO1Q12778 655 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 GPR157Q5UAW9 335 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 LCN10Q6JVE6 187 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 TMPRSS7Q7RTY8 843 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 LSRQ86X29 649 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-203ENST00000502773 PPP1R35Q8TAP8 253 aa6.47□□□□□ -1.37
PDGFC-203ENST00000502773 DCUN1D4Q92564 292 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms