RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	FAIM	Q9NVQ4	179 aa		10.23	□□□□□ -0.77
MATR3-231	ENST00000502394	ZNF581	Q9P0T4	197 aa		10.23	□□□□□ -0.77
MATR3-231	ENST00000502394	RCC2	Q9P258	522 aa	Known RBP	10.23	□□□□□ -0.77
MATR3-231	ENST00000502394	ST3GAL6	Q9Y274	331 aa		10.23	□□□□□ -0.77
MATR3-231	ENST00000502394	PLEKHA6	Q9Y2H5	1048 aa		10.23	□□□□□ -0.77
MATR3-231	ENST00000502394	KCNK7	Q9Y2U2	307 aa		10.23	□□□□□ -0.77
MATR3-231	ENST00000502394	MFNG	O00587	321 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	GEMIN2	O14893	280 aa	Known RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	WNT9B	O14905	357 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	GSTZ1	O43708	216 aa	Predicted RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	HIST1H1D	P16402	221 aa	Known RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	PRKACA	P17612	351 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	TNFRSF1A	P19438	455 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	CHAT	P28329	748 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	RBMX	P38159	391 aa	Known RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	CCL8	P80075	99 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	HOXA4	Q00056	320 aa	Predicted RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	IL18	Q14116	193 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	ZNF146	Q15072	292 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	TAF9	Q16594	264 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	MPV17L	Q2QL34	196 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394		Q6P435	159 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	ACP7	Q6ZNF0	438 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	LINC00596	Q86U02	117 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	TGIF2LY	Q8IUE0	185 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	LRRC29	Q8WV35	223 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	ST8SIA4	Q92187	359 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	EMG1	Q92979	244 aa	Known RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	BORCS5	Q969J3	196 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	CCDC32	Q9BV29	185 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	EGLN1	Q9GZT9	426 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	WDR13	Q9H1Z4	485 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	IFT22	Q9H7X7	185 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	SAP30L	Q9HAJ7	183 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	SEBOX	Q9HB31	216 aa	Predicted RBP	10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	RASL12	Q9NYN1	266 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	HSF4	Q9ULV5	492 aa		10.22	□□□□□ -0.77
MATR3-231	ENST00000502394	TRAV18	A0A075B6X5	111 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394		A6NJY4	79 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394		H7C417	338 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	CA11	O75493	328 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	NXPH2	O95156	264 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	HPX	P02790	462 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	PTHLH	P12272	177 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	COX6B1	P14854	86 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	MRPS10	P82664	201 aa	Known RBP	10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	IFITM3	Q01628	133 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	BAK1	Q16611	211 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	FAM90A1	Q86YD7	464 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	C15orf40	Q8WUR7	153 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	SMIM4	Q8WVI0	70 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	GCDH	Q92947	438 aa	Predicted RBP	10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	TRIM63	Q969Q1	353 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	C14orf79	Q96F83	325 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	ARHGAP5-AS1	Q96IT6	56 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	PSMG3-AS1	Q96PY0	264 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	PECR	Q9BY49	303 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	CXorf56	Q9H5V9	222 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	UBTD1	Q9HAC8	227 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	DCAF16	Q9NXF7	216 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	RNF7	Q9UBF6	113 aa		10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	ELF5	Q9UKW6	265 aa	Predicted RBP	10.21	□□□□□ -0.77
MATR3-231	ENST00000502394	USP9Y	O00507	2555 aa	Predicted RBP	10.21	□□□□□ -0.78
MATR3-231	ENST00000502394	TANC2	Q9HCD6	1990 aa		10.21	□□□□□ -0.78
MATR3-231	ENST00000502394	hCG_1807616	A0A1W2PRN6	198 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	GABARAP	H6UMI1	98 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	IFNL4	K9M1U5	179 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	OVOL3	O00110	214 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	SULT1C2	O00338	296 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	PDCD6	O75340	191 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	UPK1B	O75841	260 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	KNG1	P01042	644 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	GSTP1	P09211	210 aa	Known RBP	10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	CSF3	P09919	207 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	GLRA1	P23415	457 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	GABRR1	P24046	479 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	BLVRB	P30043	206 aa	Predicted RBP	10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	DGCR2	P98153	550 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	PITPNA	Q00169	270 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	CDNF	Q49AH0	187 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	PYDC2	Q56P42	97 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	SPIN3	Q5JUX0	258 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	TEX36	Q5VZQ5	186 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	C20orf204	Q6ZNR8	217 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	SNX29P2	Q8IUI4	249 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	GPX8	Q8TED1	209 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	YIPF5	Q969M3	257 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	PHF21A	Q96BD5	680 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	RAB3C	Q96E17	227 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	SEH1L	Q96EE3	360 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	CACNG6	Q9BXT2	260 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	PALMD	Q9NP74	551 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	DECR2	Q9NUI1	292 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	PPP1R3C	Q9UQK1	317 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	MRPS7	Q9Y2R9	242 aa	Known RBP	10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	RBMX2	Q9Y388	322 aa	Known RBP	10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	CACNG2	Q9Y698	323 aa		10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	HELZ2	Q9BYK8	2649 aa	Known RBP	10.2	□□□□□ -0.78
MATR3-231	ENST00000502394	TRAV24	A0A0B4J272	114 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms