RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 FAM216BQ8N7L0 139 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ASCC1Q8N9N2 400 aaKnown RBP11.35□□□□□ -0.59
CPNE1-227ENST00000498056 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 KCNG3Q8TAE7 436 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 DYNC2LI1Q8TCX1 351 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM246Q9BRR3 403 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 CCDC59Q9P031 241 aaKnown RBP11.35□□□□□ -0.59
CPNE1-227ENST00000498056 PCDHB10Q9UN67 800 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ST3GAL6Q9Y274 331 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 MYO9AB2RTY4 2548 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 IGKV1D-17A0A075B6S4 117 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 A0A1B0GW55 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM14DPA8MWL7 114 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 VWC2LB2RUY7 222 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 SIRPB1O00241 398 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 HSPB6O14558 160 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 TMPRSS2O15393 492 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 OR7C1O76099 320 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 CD37P11049 281 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 PSG2P11465 335 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 SELLP14151 372 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 CPT2P23786 658 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 SCN1BQ07699 218 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 IL13RA2Q14627 380 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 PDCD1Q15116 288 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM155Q4W5P6 130 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4L9Q6RFH8 374 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-227ENST00000498056 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-227ENST00000498056 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 CLDND2Q8NHS1 167 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 AP3S1Q92572 193 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 GAFA1Q96PS6 74 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 CCL13Q99616 98 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM165Q9HC07 324 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 OR5V1Q9UGF6 321 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 GLS2Q9UI32 602 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 ARHGAP32A7KAX9 2087 aa11.34□□□□□ -0.59
CPNE1-227ENST00000498056 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF182P17025 639 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-227ENST00000498056 RPS27AP62979 156 aaKnown RBP11.33□□□□□ -0.6
CPNE1-227ENST00000498056 IL13RA1P78552 427 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF146Q15072 292 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 TAF9Q16594 264 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 C2orf76Q3KRA6 126 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 LYPD2Q6UXB3 125 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 NLRC3Q7RTR2 1065 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 SLC36A1Q7Z2H8 476 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 LINC00596Q86U02 117 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 LRRC28Q86X40 367 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-227ENST00000498056 OR8B3Q8NGG8 313 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 OR51T1Q8NGJ9 327 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 OR5H6Q8NGV6 325 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ANGPTL6Q8NI99 470 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 RAB39BQ96DA2 213 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 Q96M66 194 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 OR8B2Q96RD0 313 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 URM1Q9BTM9 101 aaKnown RBP11.33□□□□□ -0.6
CPNE1-227ENST00000498056 MRI1Q9BV20 369 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ABRACLQ9P1F3 81 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 CTSZQ9UBR2 303 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF222Q9UK12 451 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ETV7Q9Y603 341 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 KIAA2026Q5HYC2 2103 aa11.33□□□□□ -0.6
CPNE1-227ENST00000498056 SETXQ7Z333 2677 aaKnown RBP11.32□□□□□ -0.6
CPNE1-227ENST00000498056 NOTCH2Q04721 2471 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 SH2D1BO14796 132 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 OR2H2O95918 312 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 EFNB2P52799 333 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 QRFPP83859 136 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 COL10A1Q03692 680 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 CD177Q8N6Q3 437 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 SAMD12Q8N8I0 201 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 ST8SIA4Q92187 359 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
CPNE1-227ENST00000498056 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
CPNE1-227ENST00000498056 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
CPNE1-227ENST00000498056 NEIL1Q96FI4 390 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-227ENST00000498056 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-227ENST00000498056 CHST6Q9GZX3 395 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms