RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ASXL3Q9C0F0 2248 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 TRAV36DV7A0A075B6V5 113 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 DUSP1P28562 367 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 LYPD6Q86Y78 171 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 PIGTQ969N2 578 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 SDSLQ96GA7 329 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 LIN37Q96GY3 246 aaPredicted RBP11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 NXF5Q9H1B4 397 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 HRASLS2Q9NWW9 162 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 PLA2G3Q9NZ20 509 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 A0A1B0GUS0 222 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 GP1BBP13224 206 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 IRF2P14316 349 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 SELEP16581 610 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 ERVFC1-1P60608 527 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 HNRNPKP61978 463 aaKnown RBP eCLIP11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 RSPO4Q2I0M5 234 aaPredicted RBP11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 SLC16A14Q7RTX9 510 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 C2orf72A6NCS6 295 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 SIAH2O43255 324 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 CARD17Q5XLA6 110 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 R3HDM4Q96D70 268 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 MCTS1Q9ULC4 181 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-220ENST00000497580 CRYM-AS1A6NIL9 109 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 CYB5R3P00387 301 aaPredicted RBP11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 GCGP01275 180 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 LMO1P25800 156 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 RABIFP47224 123 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 SYT3Q9BQG1 590 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 PECRQ9BY49 303 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 CALHM2Q9HA72 323 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 ISG15P05161 165 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 DYNLT3P51808 116 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 RTP5Q14D33 572 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 PRR18Q8N4B5 295 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 CLDND2Q8NHS1 167 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 SNIP1Q8TAD8 396 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 TMEM171Q8WVE6 324 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 OR5B12Q96R08 314 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 TBL1XR1Q9BZK7 514 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 A0A1W2PR80 420 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 TK1P04183 234 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 CEACAM6P40199 344 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 FBXW4P57775 412 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 TFF2Q03403 129 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 GPM6BQ13491 265 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 SGCBQ16585 318 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 PRTGQ2VWP7 1150 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 SPIN3Q5JUX0 258 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 BATF2Q8N1L9 274 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 C11orf40Q8WZ69 217 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 TBX15Q96SF7 602 aa11.44□□□□□ -0.58
GAPVD1-220ENST00000497580 CEACAM18A8MTB9 384 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 FOXS1O43638 330 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 CXCL10P02778 98 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 CTSDP07339 412 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 CCL5P13501 91 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PAX1P15863 534 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 ANOS1P23352 680 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 CDAP32320 146 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PRSS12P56730 875 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF154Q13106 437 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF774Q6NX45 483 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 C16orf82Q7Z2V1 217 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 OR5AS1Q8N127 324 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 FBXL14Q8N1E6 418 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 IL22RA1Q8N6P7 574 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF519Q8TB69 540 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 APOOQ9BUR5 198 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 NAA60Q9H7X0 242 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 FAM206AQ9NX38 181 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 V9GYS6 101 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 CELSR3Q9NYQ7 3312 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PRSS38A1L453 326 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 NKX2-6A6NCS4 301 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 C17orf105B2RV13 164 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 SRSF10O75494 262 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 CSNK1A1P48729 337 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 TLE4Q04727 773 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 KIR2DS3Q14952 304 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PDCD1Q15116 288 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF506Q5JVG8 444 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 OR1E3Q8WZA6 343 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PPIAL4AQ9Y536 164 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 TMED7-TICAM2A0A0A6YYA0 188 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 A0A1B0GU03 582 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 LILRB3O75022 631 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 TRAPPC6AO75865 159 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 OPN1MWP04001 364 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms