RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ZNF230Q9UIE0 474 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR52A1Q9UKL2 312 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 AK6Q9Y3D8 172 aaKnown RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 TRBV7-9A0A0J9YWB2 115 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 IRGMA1A4Y4 181 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SULT2B1O00204 365 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 NKX2-8O15522 239 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SNAI2O43623 268 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 PLPP2O43688 288 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR2T1O43869 369 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 RAMP3O60896 148 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 AQP8O94778 261 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 TCRBP04435 133 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF14P17017 642 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 WT1P19544 449 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ALOX5APP20292 161 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SLC6A1P30531 599 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SUMO3P55854 103 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR2B8PP59922 312 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SCN1BQ07699 218 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR5I1Q13606 314 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SPANXN2Q5MJ10 180 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ABHD17BQ5VST6 288 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 DMKNQ6E0U4 476 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OPN5Q6U736 354 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 LRRC28Q86X40 367 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR1J4Q8NGS1 313 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 COQ8AQ8NI60 647 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF519Q8TB69 540 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 M1APQ8TC57 530 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 RGP1Q92546 391 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 DDIT4LQ96D03 193 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 DIRAS2Q96HU8 199 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 DERL3Q96Q80 235 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 THAP7Q9BT49 309 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 COMMD4Q9H0A8 199 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 TXNIPQ9H3M7 391 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 PLEK2Q9NYT0 353 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 PEF1Q9UBV8 284 aaKnown RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR14J1Q9UGF5 321 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 IGLV1-36A0A0B4J1U3 117 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 TRAV25A0A0B4J276 109 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 TRDV1A0A1B0GX56 115 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 IFITM10A6NMD0 228 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NPIPA5E9PKD4 350 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 PIN1P1O15428 100 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 OGG1O15527 345 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 UPK3AO75631 287 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SIX6O95475 246 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 RENP00797 406 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 IGHV3-9P01782 118 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 CSF1P09603 554 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 LIFP15018 202 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 AGAP20933 346 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 FGF9P31371 208 aaPredicted RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 CYB561P49447 251 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SRYQ05066 204 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SLC10A1Q14973 349 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 CDK5R1Q15078 307 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 OR52W1Q6IF63 320 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF774Q6NX45 483 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF546Q86UE3 836 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SVBPQ8N300 66 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 OR5L1Q8NGL2 311 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 OR10D4PQ8NGN7 298 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 OR2G2Q8NGZ5 317 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 RNF138Q8WVD3 245 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NKD1Q969G9 470 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SMIM19Q96E16 107 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SLC30A2Q9BRI3 323 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 EGLN1Q9GZT9 426 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NXF2Q9GZY0 626 aaKnown RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 ELOVL3Q9HB03 270 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 EMC7Q9NPA0 242 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NOX4Q9NPH5 578 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 TMEM160Q9NX00 188 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 GAR1Q9NY12 217 aaKnown RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NPIPA1Q9UND3 350 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 RASD1Q9Y272 281 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 FBXO7Q9Y3I1 522 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NUP210LQ5VU65 1888 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 SPTAN1Q13813 2472 aaKnown RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 A0A0J9YW62 118 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 COLCA2A8K830 154 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 FAM166BA8MTA8 275 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 PHOX2AO14813 284 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 GGCTO75223 188 aaKnown RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 NEURL1O76050 574 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 YIF1AO95070 293 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 UBCP0CG48 685 aaKnown RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 PTHLHP12272 177 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF35P13682 527 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 MMP15P51511 669 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 MFGE8Q08431 387 aaPredicted RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 GGTLC2Q14390 218 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 C3AR1Q16581 482 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 RNASE12Q5GAN4 147 aaKnown RBP5.38□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF684Q5T5D7 378 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms