RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-223	ENST00000496296	TMEM230	Q96A57	120 aa		18.2	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF230	Q9UIE0	474 aa	Predicted RBP	18.2	■□□□□ 0.5
FGFR1-223	ENST00000496296	EDAR	Q9UNE0	448 aa		18.2	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF816-ZNF321P	A0A0X1KG74	233 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	SFT2D2	O95562	160 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	ARPC4	P59998	168 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	AANAT	Q16613	207 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	SLC51B	Q86UW2	128 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	CXorf67	Q86X51	503 aa	Predicted RBP	18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	CSNK2A3	Q8NEV1	391 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	EMG1	Q92979	244 aa	Known RBP	18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	BORCS8	Q96FH0	119 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	OPA3	Q9H6K4	179 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	TNFSF18	Q9UNG2	199 aa		18.19	■□□□□ 0.5
FGFR1-223	ENST00000496296	OR2F2	O95006	317 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	GLI4	P10075	376 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	OR2F1	Q13607	317 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	SIGIRR	Q6IA17	410 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	MRPL21	Q7Z2W9	205 aa	Known RBP	18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF546	Q86UE3	836 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	KCNRG	Q8N5I3	272 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	OR5L1	Q8NGL2	311 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	CYYR1	Q96J86	154 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF75A	Q96N20	296 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	PPA2	Q9H2U2	334 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	OBP2B	Q9NPH6	170 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	COMMD9	Q9P000	198 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	NUP50	Q9UKX7	468 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ATM	Q13315	3056 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296		A0A1W2PR80	420 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF14	P17017	642 aa	Predicted RBP	18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	AKR1C4	P17516	323 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	DTYMK	P23919	212 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ATP1B3	P54709	279 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	RSU1	Q15404	277 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	TSC22D1	Q15714	1073 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	RTBDN	Q9BSG5	229 aa	Predicted RBP	18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ELL3	Q9HB65	397 aa	Predicted RBP	18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	DECR2	Q9NUI1	292 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	SLC7A11	Q9UPY5	501 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF835	Q9Y2P0	537 aa		18.18	■□□□□ 0.5
FGFR1-223	ENST00000496296	CBR1	P16152	277 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	OPRM1	P35372	400 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	PMEL	P40967	661 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	PRR30	Q53SZ7	412 aa	Predicted RBP	18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	FAM209A	Q5JX71	171 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	BHLHA15	Q7RTS1	189 aa	Predicted RBP	18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296		Q8NFD4	153 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	ST6GALNAC5	Q9BVH7	336 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	CDH20	Q9HBT6	801 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	CACNA1G	O43497	2377 aa		18.17	■□□□□ 0.5
FGFR1-223	ENST00000496296	FAM230A	A0A1W2PPH8	454 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296		I3L521	148 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296		J3QW42	95 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	HTR3B	O95264	441 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	CSTB	P04080	98 aa	Known RBP	18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	VAMP1	P23763	118 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	CHAT	P28329	748 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	IDH3G	P51553	393 aa	Predicted RBP	18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	C6orf201	Q7Z4U5	140 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	SUN5	Q8TC36	379 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	DHRS9	Q9BPW9	319 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	PDCD10	Q9BUL8	212 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	REPIN1	Q9BWE0	567 aa	Known RBP	18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	NMES1	Q9C002	83 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	RAB18	Q9NP72	206 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	PCDHB16	Q9NRJ7	776 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	PLEKHJ1	Q9NW61	149 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	SMG1	Q96Q15	3661 aa	Known RBP	18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	CCS	O14618	274 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	NPY4R	P50391	375 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	CYCS	P99999	105 aa	Known RBP	18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	PDZK1IP1	Q13113	114 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	CHRFAM7A	Q494W8	412 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	ZNF660	Q6AZW8	331 aa	Predicted RBP	18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	PPP1R1C	Q8WVI7	109 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	WBP1	Q96G27	269 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	EHF	Q9NZC4	300 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	STARD10	Q9Y365	291 aa		18.16	■□□□□ 0.5
FGFR1-223	ENST00000496296	SVIL	O95425	2214 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	TRBV6-7	A0A0A0MS04	114 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	NGF	P01138	241 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	SFTPC	P11686	197 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	RPS2	P15880	293 aa	Known RBP	18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	IL32	P24001	234 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	UBA52	P62987	128 aa	Known RBP	18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	SUPT4H1	P63272	117 aa	Known RBP	18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	WDR31	Q8NA23	367 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	PIGM	Q9H3S5	423 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	PRORY	Q9H606	182 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	RALY	Q9UKM9	306 aa	Known RBP	18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	AMDHD2	Q9Y303	409 aa		18.15	■□□□□ 0.5
FGFR1-223	ENST00000496296	IGKV1-12	A0A0C4DH73	117 aa		18.14	■□□□□ 0.49
FGFR1-223	ENST00000496296	MSTN	O14793	375 aa		18.14	■□□□□ 0.49
FGFR1-223	ENST00000496296	SPRY1	O43609	319 aa	Predicted RBP	18.14	■□□□□ 0.49
FGFR1-223	ENST00000496296	ANGPTL7	O43827	346 aa		18.14	■□□□□ 0.49
FGFR1-223	ENST00000496296	IGKV1D-12	P01611	117 aa		18.14	■□□□□ 0.49
FGFR1-223	ENST00000496296	NMB	P08949	121 aa		18.14	■□□□□ 0.49
FGFR1-223	ENST00000496296	GABRR1	P24046	479 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms