RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 RFPL4AL1F8VTS6 287 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 GEMIN2O14893 280 aaKnown RBP18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 KNG1P01042 644 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 PSG2P11465 335 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 PDCD1Q15116 288 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 ZMYND11Q15326 602 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 SPIN3Q5JUX0 258 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM89BQ8N5H3 189 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 CMTM3Q96MX0 182 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 URM1Q9BTM9 101 aaKnown RBP18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 ABCG5Q9H222 651 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 WIPI2Q9Y4P8 454 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 TRAV38-1A0A0B4J264 116 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 PPIHO43447 177 aaKnown RBP18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 FSTL3O95633 263 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 BTG1P62324 171 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 UBE2NLQ5JXB2 153 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 FIP1L1Q6UN15 594 aaKnown RBP18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 CMTM4Q8IZR5 234 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 ATG5Q9H1Y0 275 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 MIXL1Q9H2W2 232 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 ZNF581Q9P0T4 197 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 PDZD2O15018 2839 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 IGKV1D-17A0A075B6S4 117 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 A0A0A6YYD4 124 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 METTL21EPA6NDL7 271 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 CLPXO76031 633 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 EIF4EP06730 217 aaKnown RBP18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 ELK1P19419 428 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 LRRC28Q86X40 367 aaPredicted RBP18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 LRRC75A-AS1Q8N1F1 130 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 ANGPTL6Q8NI99 470 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 RAB1CQ92928 201 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 POM121Q96HA1 1249 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 OR14J1Q9UGF5 321 aa18.24■□□□□ 0.51
ECHDC3-205ENST00000496136 IGHV2-70P01814 119 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 APOA1P02647 267 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 TFF1P04155 84 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 AMY2BP19961 511 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 CPT2P23786 658 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 GABRR1P24046 479 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 GIFP27352 417 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 CEBPDP49716 269 aaPredicted RBP18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 VEGFCP49767 419 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 PDLIM4P50479 330 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 IL13RA2Q14627 380 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM189A2Q15884 450 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 AVPI1Q5T686 147 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 LAX1Q8IWV1 398 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 TIMD4Q96H15 378 aa18.23■□□□□ 0.51
ECHDC3-205ENST00000496136 RAB27BO00194 218 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 SH2D1BO14796 132 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 TNFRSF13BO14836 293 aaPredicted RBP18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 GYPAP02724 150 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 PRDX2P32119 198 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 PITPNBP48739 271 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 SCN1BQ07699 218 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 STUMQ69YW2 141 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 SIGIRRQ6IA17 410 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 Q6P435 159 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 CD177Q8N6Q3 437 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 RAB40AQ8WXH6 277 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 S100A16Q96FQ6 103 aaKnown RBP18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 ZNF222Q9UK12 451 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A10PA6NDY2 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A18PA6NE21 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A16PA6NEW6 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A20PA6NIJ5 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A8PA6NJQ4 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A7PA6NKC0 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A22PA8MWA6 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A12PA8MX19 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A5PA8MXJ8 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A23PA8MXZ1 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 SOCS1O15524 211 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 OR7C1O76099 320 aaPredicted RBP18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 HAND1O96004 215 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A15PP0C7V4 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A13PP0C7W8 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A14PP0C7W9 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A24PP0C7X0 464 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 MDH2P40926 338 aaKnown RBP18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 GPR6P46095 362 aaPredicted RBP18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 IKZF1Q13422 519 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 MPV17LQ2QL34 196 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 MOGAT2Q3SYC2 334 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 DNM1P46Q6ZS02 220 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 LINC00596Q86U02 117 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM168AQ92567 244 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 TMEM246Q9BRR3 403 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 SEBOXQ9HB31 216 aaPredicted RBP18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 GLS2Q9UI32 602 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 PEX16Q9Y5Y5 336 aa18.22■□□□□ 0.51
ECHDC3-205ENST00000496136 MAP1AP78559 2803 aaPredicted RBP18.21■□□□□ 0.51
ECHDC3-205ENST00000496136 DEGS1O15121 323 aa18.21■□□□□ 0.51
ECHDC3-205ENST00000496136 OR2H2O95918 312 aa18.21■□□□□ 0.51
ECHDC3-205ENST00000496136 CHRM2P08172 466 aa18.21■□□□□ 0.51
ECHDC3-205ENST00000496136 GABRA2P47869 451 aa18.21■□□□□ 0.51
ECHDC3-205ENST00000496136 TMEM50BP56557 158 aa18.21■□□□□ 0.51
ECHDC3-205ENST00000496136 ATPAF1Q5TC12 328 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms