RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 CREB3L1Q96BA8 519 aa13.96□□□□□ -0.17
TMEM53-209ENST00000495630 APOL4Q9BPW4 351 aa13.96□□□□□ -0.17
TMEM53-209ENST00000495630 SLC25A19Q9HC21 320 aa13.96□□□□□ -0.17
TMEM53-209ENST00000495630 MED4Q9NPJ6 270 aa13.96□□□□□ -0.17
TMEM53-209ENST00000495630 SNX5Q9Y5X3 404 aa13.96□□□□□ -0.17
TMEM53-209ENST00000495630 DNAH9Q9NYC9 4486 aa13.96□□□□□ -0.17
TMEM53-209ENST00000495630 GNGT2O14610 69 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 MGST3O14880 152 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 MMP23AO75900 390 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 HAND1O96004 215 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 IGHA1P01876 353 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 THBS3P49746 956 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 CBX1P83916 185 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 ZNF322Q6U7Q0 402 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-209ENST00000495630 ETV3LQ6ZN32 361 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 Q8IYB0 196 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 SLAMF9Q96A28 289 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 MNTQ99583 582 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
TMEM53-209ENST00000495630 TTTY10Q9BZA0 68 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 TVP23BQ9NYZ1 205 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 GLS2Q9UI32 602 aa13.95□□□□□ -0.18
TMEM53-209ENST00000495630 PSMB11A5LHX3 300 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 PSPNO60542 156 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 IGLV1-47P01700 117 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 ANXA8P13928 327 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 CCL1P22362 96 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 GABRR1P24046 479 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 SLC6A1P30531 599 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 CEACAM3P40198 252 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 UBE2V2Q15819 145 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 HEPN1Q6WQI6 88 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 SLC25A26Q70HW3 274 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 TRAPPC6BQ86SZ2 158 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 BCAS4Q8TDM0 211 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 CORO2AQ92828 525 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 CNN2Q99439 309 aaKnown RBP13.94□□□□□ -0.18
TMEM53-209ENST00000495630 ZNF649Q9BS31 505 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 CHST6Q9GZX3 395 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 ZFP57Q9NU63 452 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 PCDHGB5Q9Y5G0 923 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 U3KQK5 164 aa13.94□□□□□ -0.18
TMEM53-209ENST00000495630 IGKV1-27A0A075B6S5 117 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 B2RBV5 119 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 MAGEB4O15481 346 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-209ENST00000495630 INMTO95050 263 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 PRKACGP22612 351 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 CD34P28906 385 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 MYCNOSP40205 109 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 CXCR4P61073 352 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 DGCR2P98153 550 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 ZNF91Q05481 1191 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 ZNF146Q15072 292 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 C9orf152Q5JTZ5 239 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 EMG1Q92979 244 aaKnown RBP13.93□□□□□ -0.18
TMEM53-209ENST00000495630 LRGUKQ96M69 825 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 GAL3ST2Q9H3Q3 398 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 TAS2R3Q9NYW6 316 aa13.93□□□□□ -0.18
TMEM53-209ENST00000495630 DSCAML1Q8TD84 2053 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 TRGV10A0A0A0MS01 117 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 FUOMA2VDF0 154 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 SH2D7A6NKC9 451 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-209ENST00000495630 OOSP1A8MZH6 123 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 RAMP3O60896 148 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 GATBO75879 557 aaKnown RBP13.92□□□□□ -0.18
TMEM53-209ENST00000495630 SERPINA3P01011 423 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 CCDC159P0C7I6 412 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 FAM106CPP0CH98 169 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 CDK2P24941 298 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 LMO1P25800 156 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 MNDAP41218 407 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 PRRX1P54821 245 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 P2RX3P56373 397 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 CDC42P60953 191 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 RPL23AP62750 156 aaKnown RBP13.92□□□□□ -0.18
TMEM53-209ENST00000495630 CCDC144NLQ6NUI1 221 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 BAIAP2L2Q6UXY1 529 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 MEPCEQ7L2J0 689 aaKnown RBP13.92□□□□□ -0.18
TMEM53-209ENST00000495630 THNSL2Q86YJ6 484 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 CCDC54Q8NEL0 328 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 PLEKHA1Q9HB21 404 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 MRM2Q9UI43 246 aaKnown RBP13.92□□□□□ -0.18
TMEM53-209ENST00000495630 ARL2BPQ9Y2Y0 163 aa13.92□□□□□ -0.18
TMEM53-209ENST00000495630 ZNF670-ZNF695F2Z2N8 137 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 LY6LH3BQJ8 138 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 TOR1AO14656 332 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 DCTN3O75935 186 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 ZFPL1O95159 310 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 HOXB6P17509 224 aaKnown RBP13.91□□□□□ -0.18
TMEM53-209ENST00000495630 DUSP1P28562 367 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 OR3A1P47881 315 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 KPNB1Q14974 876 aaKnown RBP13.91□□□□□ -0.18
TMEM53-209ENST00000495630 TPTE2P1Q5T6R2 138 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 PRAMEF5Q5TYX0 476 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 OR2W3Q7Z3T1 314 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 ZNF329Q86UD4 541 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 SLC35F2Q8IXU6 374 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 ADGRG5Q8IZF4 528 aa13.91□□□□□ -0.18
TMEM53-209ENST00000495630 HS3ST5Q8IZT8 346 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms