RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 HTR1FP30939 366 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 BLCAPP62952 87 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 SLC34A1Q06495 639 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 GRK1Q15835 563 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 ZBTB49Q6ZSB9 765 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 ZDHHC13Q8IUH4 622 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 GABARAPL1Q9H0R8 117 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 HILPDAQ9Y5L2 63 aa18.68■□□□□ 0.58
COL27A1-208ENST00000494780 IGHA1P01876 353 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 GABRR1P24046 479 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 AZGP1P25311 298 aaKnown RBP18.67■□□□□ 0.58
COL27A1-208ENST00000494780 VDAC2P45880 294 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-208ENST00000494780 ZNF91Q05481 1191 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 DNAAF1Q8NEP3 725 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 OR52N4Q8NGI2 321 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 NDNFQ8TB73 568 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 PP6455Q8WZ26 134 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 OR5M11Q96RB7 305 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 CLEC7AQ9BXN2 247 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 TMEM133Q9H2Q1 129 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 NECAP2Q9NVZ3 263 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 ZNF281Q9Y2X9 895 aa18.67■□□□□ 0.58
COL27A1-208ENST00000494780 FAM90A22PA8MWA6 464 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 CYB5AP00167 134 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 JUNBP17275 347 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-208ENST00000494780 ATP1B3P54709 279 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 Q6ZS46 218 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 FAM58AQ8N1B3 248 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 PRSS35Q8N3Z0 413 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 TPRX1Q8N7U7 411 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 OR10H4Q8NGA5 316 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 MRAPQ8TCY5 172 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 SGCDQ92629 289 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 IL36RNQ9UBH0 155 aa18.66■□□□□ 0.58
COL27A1-208ENST00000494780 TRBV2A0A0J9YWF9 115 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 LOC107986453A0A1B0GWG9 222 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 MGST3O14880 152 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 PSPNO60542 156 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 UBCP0CG48 685 aaKnown RBP18.65■□□□□ 0.58
COL27A1-208ENST00000494780 FASP25445 335 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 ERP29P30040 261 aaKnown RBP18.65■□□□□ 0.58
COL27A1-208ENST00000494780 RBP2P50120 134 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 LOXL3P58215 753 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 TMED1Q13445 227 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 IL18R1Q13478 541 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 ZNF146Q15072 292 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 OCSTAMPQ9BR26 566 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 CHST6Q9GZX3 395 aa18.65■□□□□ 0.58
COL27A1-208ENST00000494780 RBFOX1Q9NWB1 397 aaKnown RBP18.65■□□□□ 0.58
COL27A1-208ENST00000494780 UBE2J1Q9Y385 318 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-208ENST00000494780 APOL3O95236 402 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 HTR1DP28221 377 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 ATP6V1E1P36543 226 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 NPBWR2P48146 333 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 SPIN3Q5JUX0 258 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 C16orf82Q7Z2V1 217 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 FAM220AQ7Z4H9 259 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 PHF21AQ96BD5 680 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 CIB1Q99828 191 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 GLS2Q9UI32 602 aa18.64■□□□□ 0.57
COL27A1-208ENST00000494780 ENTPD6O75354 484 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 BCL3P20749 454 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 PRKACBP22694 351 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 DUSP1P28562 367 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 KIR3DL2P43630 455 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 POU3F4P49335 361 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 P2RX3P56373 397 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 ISL1P61371 349 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 CD83Q01151 205 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 TMEM95Q3KNT9 176 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 UTS2BQ765I0 119 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 TRAPPC6BQ86SZ2 158 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 OR5AU1Q8NGC0 362 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 OR4P4Q8NGL7 312 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 OR8J1Q8NGP2 316 aa18.63■□□□□ 0.57
COL27A1-208ENST00000494780 IGKV1-9A0A0C4DH69 117 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 MMP23AO75900 390 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 PRKACAP17612 351 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 OR3A1P47881 315 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 MTCP1P56278 107 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 CDC42P60953 191 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 TMEM244Q5VVB8 128 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 OR52W1Q6IF63 320 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 RTN4RL2Q86UN3 420 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 RDH10Q8IZV5 341 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 WFDC9Q8NEX5 89 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 RFKQ969G6 155 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 ADAT3Q96EY9 351 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-208ENST00000494780 AKR1E2Q96JD6 320 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 AURKAIP1Q9NWT8 199 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-208ENST00000494780 DPM3Q9P2X0 92 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 GNG8Q9UK08 70 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 AP4S1Q9Y587 144 aa18.62■□□□□ 0.57
COL27A1-208ENST00000494780 ALX3O95076 343 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 ATF1P18846 271 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 POLR2IP36954 125 aaKnown RBP18.61■□□□□ 0.57
COL27A1-208ENST00000494780 ZNF85Q03923 595 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 TP53I3Q53FA7 332 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 LHFPL2Q6ZUX7 228 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 AMIGO2Q86SJ2 522 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms