RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 SLC16A6O15403 523 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 HAND1O96004 215 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 OCM2P0CE71 109 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 OCMP0CE72 109 aaPredicted RBP7.78□□□□□ -1.16
MSH5-218ENST00000494646 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 ZNF20P17024 532 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 PRKACAP17612 351 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 GABRR1P24046 479 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 AZGP1P25311 298 aaKnown RBP7.78□□□□□ -1.16
MSH5-218ENST00000494646 SNRPGP62308 76 aaKnown RBP7.78□□□□□ -1.16
MSH5-218ENST00000494646 SCN1BQ07699 218 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 DYNC1I2Q13409 638 aaKnown RBP7.78□□□□□ -1.16
MSH5-218ENST00000494646 CNN3Q15417 329 aaKnown RBP7.78□□□□□ -1.16
MSH5-218ENST00000494646 FAM189A2Q15884 450 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 LRRC75BQ2VPJ9 315 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 TM4SF20Q53R12 229 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 MEDAGQ5VYS4 303 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 KCTD20Q7Z5Y7 419 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 FAM58AQ8N1B3 248 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 ACBD7Q8N6N7 88 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 CCDC54Q8NEL0 328 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 OR51A4Q8NGJ6 313 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 PIFOQ8TCI5 191 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 CHAC2Q8WUX2 184 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 PP6455Q8WZ26 134 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 LGALS12Q96DT0 336 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 C4orf36Q96KX1 117 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 MBOAT4Q96T53 435 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 ISG20L2Q9H9L3 353 aaKnown RBP7.78□□□□□ -1.16
MSH5-218ENST00000494646 FBLN5Q9UBX5 448 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 FOXJ3Q9UPW0 622 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 MYRFQ9Y2G1 1151 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 GSTK1Q9Y2Q3 226 aa7.78□□□□□ -1.16
MSH5-218ENST00000494646 E9PQ18 207 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 SIRPB1O00241 398 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 BPNT1O95861 308 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 CYB5AP00167 134 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 ISG15P05161 165 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 IGHV1-8P0DP01 117 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
MSH5-218ENST00000494646 PEX2P28328 305 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 GABRA5P31644 462 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 KIR2DS4P43632 304 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 ALKBH1Q13686 389 aaKnown RBP7.77□□□□□ -1.17
MSH5-218ENST00000494646 GRK1Q15835 563 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 SSX2Q16385 188 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 SLC25A30Q5SVS4 291 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 LDLRAD2Q5SZI1 272 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 ZFP1Q6P2D0 407 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 CRIP3Q6Q6R5 217 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 ENTHD1Q8IYW4 607 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OR8H2Q8N162 312 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 ZNF676Q8N7Q3 588 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OR4S1Q8NGB4 309 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OR5D18Q8NGL1 313 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OR13C3Q8NGS6 347 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OR13C9Q8NGT0 318 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OR13D1Q8NGV5 346 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 SVIPQ8NHG7 77 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 C10orf35Q96D05 121 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 PELI1Q96FA3 418 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 OPALINQ96PE5 141 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 ING3Q9NXR8 418 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 HHLA2Q9UM44 414 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 HILPDAQ9Y5L2 63 aa7.77□□□□□ -1.17
MSH5-218ENST00000494646 IGKV1-12A0A0C4DH73 117 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 LOC100130705A0A1B0GUX0 176 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 hADV38S2A0JD32 116 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 MEGF11A6BM72 1044 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 FAM90A8PA6NJQ4 464 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 SNTNA6NMZ2 147 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 OR4C45A6NMZ5 311 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 E9PI62 339 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 CHST1O43916 411 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 PSPNO60542 156 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 MMP23AO75900 390 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 BAG2O95816 211 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 TSPAN15O95858 294 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 IGKV1D-12P01611 117 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 VSIG10L2P0DP72 767 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 GABRB1P18505 474 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 PRKACBP22694 351 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 CCR9P51686 369 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 ACTA2P62736 377 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 ACTG2P63267 376 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 ACTC1P68032 377 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 ACTA1P68133 377 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 ZNF91Q05481 1191 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 PDZK1IP1Q13113 114 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 HABP2Q14520 560 aaPredicted RBP7.76□□□□□ -1.17
MSH5-218ENST00000494646 FDX2Q6P4F2 183 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 CCBE1Q6UXH8 406 aaPredicted RBP7.76□□□□□ -1.17
MSH5-218ENST00000494646 ZBTB49Q6ZSB9 765 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 LHFPL2Q6ZUX7 228 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 UTS2BQ765I0 119 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 TCF23Q7RTU1 214 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 TMEM219Q86XT9 240 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 DNAAF1Q8NEP3 725 aa7.76□□□□□ -1.17
MSH5-218ENST00000494646 RHOXF1Q8NHV9 184 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms