RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 OR3A4PP47883 348 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 CAV3P56539 151 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 RIPPLY3P57055 190 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 COL10A1Q03692 680 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 ZNF146Q15072 292 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 SSX1Q16384 188 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 KCTD21Q4G0X4 260 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 UBE2UQ5VVX9 321 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 ZNF773Q6PK81 442 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 ASCL4Q6XD76 172 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 LY6G5BQ8NDX9 201 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 DCTN5Q9BTE1 182 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 MRI1Q9BV20 369 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
COL1A1-208ENST00000494334 SEBOXQ9HB31 216 aaPredicted RBP11.2□□□□□ -0.62
COL1A1-208ENST00000494334 RPUSD1Q9UJJ7 312 aaKnown RBP11.2□□□□□ -0.62
COL1A1-208ENST00000494334 HAND1O96004 215 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 UCHL1P09936 223 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 PSMA1P25786 263 aaKnown RBP11.19□□□□□ -0.62
COL1A1-208ENST00000494334 DUSP1P28562 367 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 GABRA5P31644 462 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 CAPZA1P52907 286 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 SNU13P55769 128 aaKnown RBP11.19□□□□□ -0.62
COL1A1-208ENST00000494334 TRAM1Q15629 374 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 HSD17B12Q53GQ0 312 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 ELP2Q6IA86 826 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
COL1A1-208ENST00000494334 LYPD6Q86Y78 171 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 CDH26Q8IXH8 852 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 PNLDC1Q8NA58 520 aaKnown RBP11.19□□□□□ -0.62
COL1A1-208ENST00000494334 H1FXQ92522 213 aaKnown RBP11.19□□□□□ -0.62
COL1A1-208ENST00000494334 FAM192AQ9GZU8 254 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 CNTD2Q9H8S5 307 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 ELL3Q9HB65 397 aaPredicted RBP11.19□□□□□ -0.62
COL1A1-208ENST00000494334 TCF7L1Q9HCS4 588 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
COL1A1-208ENST00000494334 DOCK11Q5JSL3 2073 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 TMEM82A0PJX8 343 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 K7N7A8 449 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 ZNF737O75373 536 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 CDRT1O95170 752 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 FSHBP01225 129 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 TK1P04183 234 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 PPIAL4GP0DN37 164 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 SRMP19623 302 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 MTNR1BP49286 362 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 FGF12P61328 243 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 ARF6P62330 175 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 FABP5Q01469 135 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 LRRTM1Q86UE6 522 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 JAGN1Q8N5M9 183 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 TEX29Q8N6K0 151 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
COL1A1-208ENST00000494334 Q8NFD4 153 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 OR10K1Q8NGX5 313 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 NANPQ8TBE9 248 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 PHYHIPQ92561 330 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 FCGR1BQ92637 280 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 SNX22Q96L94 193 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 FAM234AQ9H0X4 552 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 METTL9Q9H1A3 318 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 GLS2Q9UI32 602 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 ING4Q9UNL4 249 aa11.18□□□□□ -0.62
COL1A1-208ENST00000494334 MEGF11A6BM72 1044 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 SH2D1BO14796 132 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 PSPNO60542 156 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 RGS9O75916 674 aaPredicted RBP11.17□□□□□ -0.62
COL1A1-208ENST00000494334 HTR3BO95264 441 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 OR2H2O95918 312 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 MMP9P14780 707 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 LMO1P25800 156 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 PSMB9P28065 219 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 BMXP51813 675 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 PDCD1Q15116 288 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 RSU1Q15404 277 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
COL1A1-208ENST00000494334 Q6P435 159 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 C17orf107Q6ZR85 190 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 NKAIN3Q8N8D7 197 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 OR51T1Q8NGJ9 327 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 MUL1Q969V5 352 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 UPRTQ96BW1 309 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 DMRTB1Q96MA1 342 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 S100A13Q99584 98 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
COL1A1-208ENST00000494334 C19orf12Q9NSK7 152 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 NDUFB11Q9NX14 153 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 IL36GQ9NZH8 169 aa11.17□□□□□ -0.62
COL1A1-208ENST00000494334 CUBNO60494 3623 aa11.16□□□□□ -0.62
COL1A1-208ENST00000494334 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
COL1A1-208ENST00000494334 TRBV23-1A0A0A0MS06 115 aa11.16□□□□□ -0.62
COL1A1-208ENST00000494334 SIRPB1O00241 398 aa11.16□□□□□ -0.62
COL1A1-208ENST00000494334 CCRL2O00421 344 aa11.16□□□□□ -0.62
COL1A1-208ENST00000494334 TNFAIP8O95379 198 aa11.16□□□□□ -0.62
COL1A1-208ENST00000494334 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms