RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 H7C417 338 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 M0R233 179 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 GPR171O14626 319 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 RER1O15258 196 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 MAGEB4O15481 346 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 MLNRO43193 412 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 TXNL1O43396 289 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PPIHO43447 177 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 RAB36O95755 333 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 IGHV1-46P01743 117 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SAGP10523 405 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ETS2P15036 469 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CBR1P16152 277 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 NPR2P20594 1047 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 USF1P22415 310 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 AADACP22760 399 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 MDH1P40925 334 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 HTR5AP47898 357 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 MRPL19P49406 292 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ATP4BP51164 291 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 EFNA4P52798 201 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 HCCSP53701 268 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PSME3P61289 254 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ERVK-16P61578 105 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 GNGT1P63211 74 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PSPHP78330 225 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PSG4Q00888 419 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SPIBQ01892 262 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 HSF2Q03933 536 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 RBBP4Q09028 425 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 TRAP1Q12931 704 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 KRR1Q13601 381 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PDK3Q15120 406 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CHRFAM7AQ494W8 412 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CLEC12AQ5QGZ9 265 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 METTL11BQ5VVY1 283 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 AP1ARQ63HQ0 302 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 OR2T2Q6IF00 324 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ULK3Q6PHR2 472 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 TTC33Q6PID6 262 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SMARCD3Q6STE5 483 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 BRD3OSQ6XYD6 125 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PLEKHG7Q6ZR37 379 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SLC16A14Q7RTX9 510 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 WDR86Q86TI4 376 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 HIPK1Q86Z02 1210 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SLC22A24Q8N4F4 322 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SLC30A7Q8NEW0 376 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SLC26A10Q8NG04 563 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 OR4K13Q8NH42 304 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 OCC1Q8TAD7 63 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SLC7A13Q8TCU3 470 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SLC26A7Q8TE54 656 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM239Q8WW34 195 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ITLN1Q8WWA0 313 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 MRPL24Q96A35 216 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SPSB1Q96BD6 273 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CCDC124Q96CT7 223 aaKnown RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SAMD8Q96LT4 415 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PRRC1Q96M27 445 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ECSITQ9BQ95 431 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 LINC00470Q9BZP3 86 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 FGF23Q9GZV9 251 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 SYT4Q9H2B2 425 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ELL3Q9HB65 397 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM27Q9HBJ8 222 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CDH20Q9HBT6 801 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 NANSQ9NR45 359 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 INIPQ9NRY2 104 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 UFSP2Q9NUQ7 469 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ARMC1Q9NVT9 282 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 GLTPQ9NZD2 209 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CALML5Q9NZT1 146 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 AURKCQ9UQB9 309 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 RASD1Q9Y272 281 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 LHFPL6Q9Y693 200 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 U3KQV3 271 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 MGAM2Q2M2H8 2515 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 IQCMA0A1B0GVH7 501 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 C5orf52A6NGY3 159 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 A6NIN4 97 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TRAPPC2LH3BP13 241 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 RPL36A-HNRNPH2H7BZ11 118 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TRIM77I1YAP6 450 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 SLC1A7O00341 560 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TLX2O43763 284 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 EIF1BO60739 113 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OR6A2O95222 327 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 PRB2P02812 416 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 SEMG1P04279 462 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 SFTPBP07988 381 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 GUSBP08236 651 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TSPAN19P0C672 248 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TROVE2P10155 538 aaKnown RBP eCLIP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 UQCRBP14927 111 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 HIST1H1CP16403 213 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MPZP25189 248 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 RRM2P31350 389 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 KDELR2P33947 212 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms