RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 FIP1L1Q6UN15 594 aaKnown RBP14.38□□□□□ -0.11
LIME1-208ENST00000493265 LRRC28Q86X40 367 aaPredicted RBP14.38□□□□□ -0.11
LIME1-208ENST00000493265 TMEM104Q8NE00 496 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 C1orf147Q96MC9 270 aaPredicted RBP14.38□□□□□ -0.11
LIME1-208ENST00000493265 CCL13Q99616 98 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 TMEM246Q9BRR3 403 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 DCUN1D5Q9BTE7 237 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 BARHL1Q9BZE3 327 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 SELENOIQ9C0D9 397 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 CST11Q9H112 138 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 HES4Q9HCC6 221 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 PCDHB16Q9NRJ7 776 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 IL36GQ9NZH8 169 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 PCDHB10Q9UN67 800 aa14.38□□□□□ -0.11
LIME1-208ENST00000493265 FBN3Q75N90 2809 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 RFPL4AA6NLU0 287 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 RFPL4AL1F8VTS6 287 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 ZNF780AO75290 641 aaPredicted RBP14.37□□□□□ -0.11
LIME1-208ENST00000493265 PAHP00439 452 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 PSG2P11465 335 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 GTF2F2P13984 249 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 MUC1P15941 1255 aaPredicted RBP14.37□□□□□ -0.11
LIME1-208ENST00000493265 MGMTP16455 207 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 FGF12P61328 243 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 PLA2G7Q13093 441 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 ZNF404Q494X3 552 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 PRSS57Q6UWY2 283 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 LYPD2Q6UXB3 125 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 DNM1P46Q6ZS02 220 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 CIARTQ8N365 385 aaPredicted RBP14.37□□□□□ -0.11
LIME1-208ENST00000493265 LGALS14Q8TCE9 139 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
LIME1-208ENST00000493265 GHRLQ9UBU3 117 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 OR5V1Q9UGF6 321 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 ST3GAL6Q9Y274 331 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 ARID1AO14497 2285 aa14.37□□□□□ -0.11
LIME1-208ENST00000493265 IGKV1D-17A0A075B6S4 117 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 TMEM272A0A1B0GTI8 110 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 VWC2LB2RUY7 222 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 H7C1Q1 480 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 SMAD7O15105 426 aaKnown RBP14.36□□□□□ -0.11
LIME1-208ENST00000493265 ADAM20O43506 726 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 KNG1P01042 644 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 GABRR1P24046 479 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 PRDX2P32119 198 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 BMXP51813 675 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 IKZF1Q13422 519 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 UNC119Q13432 240 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 KCNJ8Q15842 424 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 STUMQ69YW2 141 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 ELP2Q6IA86 826 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 PRIMA1Q86XR5 153 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 CROCCP3Q8IVE0 287 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 MUC20Q8N307 709 aaPredicted RBP14.36□□□□□ -0.11
LIME1-208ENST00000493265 KCNG3Q8TAE7 436 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 COX4I2Q96KJ9 171 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 TMEM59Q9BXS4 323 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 METRNQ9UJH8 293 aa14.36□□□□□ -0.11
LIME1-208ENST00000493265 IGHV4-61A0A0C4DH41 118 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 A0A1B0GW55 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 NKX6-3A6NJ46 265 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 CEACAM18A8MTB9 384 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 KIAA1324LA8MWY0 1029 aaPredicted RBP14.35□□□□□ -0.11
LIME1-208ENST00000493265 RNF223E7ERA6 249 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 SIRPB1O00241 398 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 TMPRSS2O15393 492 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 HAND1O96004 215 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L2P0CJ85 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L3P0CJ86 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L4P0CJ87 422 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L5P0CJ88 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L6P0CJ89 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L7P0CJ90 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 ZNF44P15621 663 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 RPS2P15880 293 aaKnown RBP14.35□□□□□ -0.11
LIME1-208ENST00000493265 SLC25A16P16260 332 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 ZNF182P17025 639 aaPredicted RBP14.35□□□□□ -0.11
LIME1-208ENST00000493265 SOX6P35712 828 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 EFNB2P52799 333 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 CAPZA1P52907 286 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 RBM11P57052 281 aaKnown RBP14.35□□□□□ -0.11
LIME1-208ENST00000493265 QRFPP83859 136 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 TAF9Q16594 264 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4L9Q6RFH8 374 aaPredicted RBP14.35□□□□□ -0.11
LIME1-208ENST00000493265 SPICQ8N5J4 248 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 CD177Q8N6Q3 437 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 FAM216BQ8N7L0 139 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 OR51T1Q8NGJ9 327 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 OR5H6Q8NGV6 325 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 CLDND2Q8NHS1 167 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 ANGPTL6Q8NI99 470 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DYNC2LI1Q8TCX1 351 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 RHOFQ9HBH0 211 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 ZNF581Q9P0T4 197 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 DUX4Q9UBX2 424 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 GLS2Q9UI32 602 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 TLN2Q9Y4G6 2542 aa14.35□□□□□ -0.11
LIME1-208ENST00000493265 A6NHS1 94 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 TMEM14DPA8MWL7 114 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 ZNF701M0R085 212 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms