RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 METTL9Q9H1A3 318 aa13.9□□□□□ -0.18
CCDC13-208ENST00000492806 RBFOX1Q9NWB1 397 aaKnown RBP13.9□□□□□ -0.18
CCDC13-208ENST00000492806 CDC42EP3Q9UKI2 254 aa13.9□□□□□ -0.18
CCDC13-208ENST00000492806 INSIG2Q9Y5U4 225 aa13.9□□□□□ -0.18
CCDC13-208ENST00000492806 JMJD1CQ15652 2540 aa13.9□□□□□ -0.18
CCDC13-208ENST00000492806 KIR2DS1A0A191URI9 304 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 TRDV1A0A1B0GX56 115 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 TRIM64CA6NLI5 447 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 ZNF780AO75290 641 aaPredicted RBP13.89□□□□□ -0.19
CCDC13-208ENST00000492806 INMTO95050 263 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 OR3A4PP47883 348 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 GP2P55259 537 aaKnown RBP13.89□□□□□ -0.19
CCDC13-208ENST00000492806 FGF12P61328 243 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 RSU1Q15404 277 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 DGUOKQ16854 277 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 GLT8D1Q68CQ7 371 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 LYPD6Q86Y78 171 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 JAGN1Q8N5M9 183 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 ST8SIA4Q92187 359 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 MUL1Q969V5 352 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 DACT3Q96B18 629 aaPredicted RBP13.89□□□□□ -0.19
CCDC13-208ENST00000492806 FAM192AQ9GZU8 254 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 SLC25A10Q9UBX3 287 aaPredicted RBP13.89□□□□□ -0.19
CCDC13-208ENST00000492806 OR14J1Q9UGF5 321 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 MAB21L2Q9Y586 359 aa13.89□□□□□ -0.19
CCDC13-208ENST00000492806 MAGEA13PA6NCF6 341 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 INAFM1C9JVW0 142 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 SH2D1BO14796 132 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 HAND1O96004 215 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 SFTPBP07988 381 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 CD37P11049 281 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 IKZF1Q13422 519 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 IL13RA2Q14627 380 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 NEDD8Q15843 81 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 BTN2A1Q7KYR7 527 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 C1QL2Q7Z5L3 287 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 LRRTM1Q86UE6 522 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 BATF2Q8N1L9 274 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 TMEM185AQ8NFB2 350 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 OR51T1Q8NGJ9 327 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 C8orf46Q8TAG6 207 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 SNX22Q96L94 193 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 NUDT16L1Q9BRJ7 211 aaKnown RBP13.88□□□□□ -0.19
CCDC13-208ENST00000492806 SHARPINQ9H0F6 387 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 ELL3Q9HB65 397 aaPredicted RBP13.88□□□□□ -0.19
CCDC13-208ENST00000492806 MMP26Q9NRE1 261 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 GHRLQ9UBU3 117 aa13.88□□□□□ -0.19
CCDC13-208ENST00000492806 TRBV23-1A0A0A0MS06 115 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 TRAV1-2A0A0B4J238 106 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 A0A1B0GW55 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 C22orf46C9J442 243 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 CRLF1O75462 422 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 FCN3O75636 299 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 CSTBP04080 98 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L2P0CJ85 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L3P0CJ86 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L4P0CJ87 422 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L5P0CJ88 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L6P0CJ89 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L7P0CJ90 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 PPIAL4GP0DN37 164 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 JUNBP17275 347 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 FGF9P31371 208 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 PSMD7P51665 324 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 PAX8Q06710 450 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 NHLRC3Q5JS37 347 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 C1orf100Q5SVJ3 147 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 FAM120AOSQ5T036 256 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 FAHD2BQ6P2I3 314 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4L9Q6RFH8 374 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 ZNRF1Q8ND25 227 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 OR5D13Q8NGL4 314 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 PPP1R35Q8TAP8 253 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 MRPS24Q96EL2 167 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 FAHD2AQ96GK7 314 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DCTN5Q9BTE1 182 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 MRI1Q9BV20 369 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 TMPRSS13Q9BYE2 586 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 PPIL3Q9H2H8 161 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 CNTD2Q9H8S5 307 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 EXOSC4Q9NPD3 245 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DUX4Q9UBX2 424 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 RPUSD1Q9UJJ7 312 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 STUB1Q9UNE7 303 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 ING4Q9UNL4 249 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 GSTK1Q9Y2Q3 226 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 MRPS28Q9Y2Q9 187 aaKnown RBP13.87□□□□□ -0.19
CCDC13-208ENST00000492806 DSCAML1Q8TD84 2053 aa13.87□□□□□ -0.19
CCDC13-208ENST00000492806 K7N7A8 449 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 TK1P04183 234 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 UBBP0CG47 229 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 SELLP14151 372 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 NDUFB7P17568 137 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 ADRA2CP18825 462 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 CEBPDP49716 269 aaPredicted RBP13.86□□□□□ -0.19
CCDC13-208ENST00000492806 CAPZA1P52907 286 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 COL10A1Q03692 680 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
CCDC13-208ENST00000492806 OSR2Q8N2R0 312 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms