RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 ZSCAN4Q8NAM6 433 aaPredicted RBP12.2□□□□□ -0.46
TOM1-215ENST00000491987 ZNF555Q8NEP9 628 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 STMN2Q93045 179 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 SNX22Q96L94 193 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 SPACA5Q96QH8 159 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 SSX3Q99909 188 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 CHST6Q9GZX3 395 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 PPA2Q9H2U2 334 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 INPP5EQ9NRR6 644 aa12.2□□□□□ -0.46
TOM1-215ENST00000491987 TRBV2A0A0J9YWF9 115 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 C17orf98A8MV24 154 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 ZNF728P0DKX0 622 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 GABRR1P24046 479 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 PDZK1IP1Q13113 114 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 GRK1Q15835 563 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 LY6EQ16553 131 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 SMN1Q16637 294 aaKnown RBP12.19□□□□□ -0.46
TOM1-215ENST00000491987 TCF23Q7RTU1 214 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 TPRX1Q8N7U7 411 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 OR52N4Q8NGI2 321 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 OR5D18Q8NGL1 313 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 CITED1Q99966 193 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 ZCCHC4Q9H5U6 513 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 NEK6Q9HC98 313 aa12.19□□□□□ -0.46
TOM1-215ENST00000491987 SMPD3Q9NY59 655 aaPredicted RBP12.19□□□□□ -0.46
TOM1-215ENST00000491987 RPL36Q9Y3U8 105 aaKnown RBP12.19□□□□□ -0.46
TOM1-215ENST00000491987 TRRAPQ9Y4A5 3859 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 IGKV1-12A0A0C4DH73 117 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 SIRPB1O00241 398 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 PSPNO60542 156 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 ZFPL1O95159 310 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 IGKV1D-12P01611 117 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 PEX2P28328 305 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 TGFBR2P37173 567 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 GBX2P52951 348 aaPredicted RBP12.18□□□□□ -0.46
TOM1-215ENST00000491987 LGALS4P56470 323 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 PROK1P58294 105 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 ZNF146Q15072 292 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 KLHL22Q53GT1 634 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 TREML4Q6UXN2 200 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 LHFPL4Q7Z7J7 247 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 TSEN15Q8WW01 171 aaKnown RBP12.18□□□□□ -0.46
TOM1-215ENST00000491987 PDCD1LG2Q9BQ51 273 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 COMMD4Q9H0A8 199 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 MEGF9Q9H1U4 602 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 C16orf95Q9H693 158 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 SEBOXQ9HB31 216 aaPredicted RBP12.18□□□□□ -0.46
TOM1-215ENST00000491987 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 DHDHQ9UQ10 334 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 GSTK1Q9Y2Q3 226 aa12.18□□□□□ -0.46
TOM1-215ENST00000491987 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 TMEM212A6NML5 194 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 WBP4O75554 376 aaKnown RBP12.17□□□□□ -0.46
TOM1-215ENST00000491987 TSPAN9O75954 239 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 MT-ND2P03891 347 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 HCKP08631 526 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 CCDC159P0C7I6 412 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 LIMS3P0CW19 117 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 LIMS4P0CW20 117 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 IGHV1-8P0DP01 117 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
TOM1-215ENST00000491987 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
TOM1-215ENST00000491987 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
TOM1-215ENST00000491987 LRRC36Q1X8D7 754 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 PLA1AQ53H76 456 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 SPIN3Q5JUX0 258 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 OR4S1Q8NGB4 309 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 OR13D1Q8NGV5 346 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 ZNF714Q96N38 554 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 RDH12Q96NR8 316 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 EXOSC4Q9NPD3 245 aaKnown RBP12.17□□□□□ -0.46
TOM1-215ENST00000491987 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
TOM1-215ENST00000491987 GLS2Q9UI32 602 aa12.17□□□□□ -0.46
TOM1-215ENST00000491987 SULT1B1O43704 296 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 CLPXO76031 633 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 KDM4BO94953 1096 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 CLIC3O95833 236 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 RBP4P02753 201 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 ARG1P05089 322 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 OR3A1P47881 315 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 LPCAT4Q643R3 524 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 SLC35E4Q6ICL7 350 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 CRIP3Q6Q6R5 217 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 SERPINA12Q8IW75 414 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 DYNAPQ8N1N2 210 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 OR5D14Q8NGL3 314 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 CNIH3Q8TBE1 160 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 FGF20Q9NP95 211 aaPredicted RBP12.16□□□□□ -0.46
TOM1-215ENST00000491987 LINC00312Q9Y6C7 94 aa12.16□□□□□ -0.46
TOM1-215ENST00000491987 FAM90A8PA6NJQ4 464 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 ODF3BA8MYP8 253 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 SH2D1BO14796 132 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 MGST3O14880 152 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 OR2H2O95918 312 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 RPSAP08865 295 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms