RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PDZK1IP1Q13113 114 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 GALEQ14376 348 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 AANATQ16613 207 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 LDLRAD2Q5SZI1 272 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 LHFPL2Q6ZUX7 228 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 Q8IYB0 196 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 C10orf67Q8IYJ2 551 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 FAM58AQ8N1B3 248 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 TPRX1Q8N7U7 411 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 RFT1Q96AA3 541 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 FBLN5Q9UBX5 448 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 MEGF8Q7Z7M0 2845 aa14.59□□□□□ -0.07
HMGN1-219ENST00000491183 IGKV1-12A0A0C4DH73 117 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 LOC100130705A0A1B0GUX0 176 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 SNTNA6NMZ2 147 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 E9PI62 339 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 TIMM23O14925 209 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 IGKV1D-12P01611 117 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 LGALS4P56470 323 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ACTA2P62736 377 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ACTG2P63267 376 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 MEF2CQ06413 473 aaPredicted RBP14.58□□□□□ -0.08
HMGN1-219ENST00000491183 EDDM3AQ14507 147 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ZNF146Q15072 292 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ZBTB49Q6ZSB9 765 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 PQLC1Q8N2U9 271 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 OR4S1Q8NGB4 309 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 OR13C3Q8NGS6 347 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 SPSB1Q96BD6 273 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 OPALINQ96PE5 141 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 SPACA5Q96QH8 159 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ALG8Q9BVK2 526 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 CHST6Q9GZX3 395 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 TCF7L1Q9HCS4 588 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 FAM118AQ9NWS6 357 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ERVK13-1Q9NX77 482 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 SIGLEC9Q9Y336 463 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 WNK1Q9H4A3 2382 aa14.58□□□□□ -0.08
HMGN1-219ENST00000491183 ODF3BA8MYP8 253 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 M0QZ24 198 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 CYB5AP00167 134 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 RBP4P02753 201 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 MT-ND2P03891 347 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 IGHV1-8P0DP01 117 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 PRKACAP17612 351 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 PEX2P28328 305 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 KIR2DS4P43632 304 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 SNU13P55769 128 aaKnown RBP14.57□□□□□ -0.08
HMGN1-219ENST00000491183 GRK1Q15835 563 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 SYS1Q8N2H4 156 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 ZNF676Q8N7Q3 588 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 OR11H6Q8NGC7 330 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 OR13C9Q8NGT0 318 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 APH1BQ8WW43 257 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 HMG20AQ9NP66 347 aa14.57□□□□□ -0.08
HMGN1-219ENST00000491183 MRPS18AQ9NVS2 196 aaKnown RBP14.57□□□□□ -0.08
HMGN1-219ENST00000491183 hADV38S2A0JD32 116 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 CHST1O43916 411 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 MPZL2O60487 215 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 ARG1P05089 322 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 GABRR1P24046 479 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 OR3A1P47881 315 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 RAB13P51153 203 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 ZNF626Q68DY1 528 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 OR52I1Q8NGK6 324 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 OR13D1Q8NGV5 346 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 Q96MT0 163 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 ZNF714Q96N38 554 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 ZCCHC4Q9H5U6 513 aa14.56□□□□□ -0.08
HMGN1-219ENST00000491183 VGLL3A8MV65 326 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 KDM4BO94953 1096 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 ZFPL1O95159 310 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 FADS2O95864 444 aaKnown RBP14.55□□□□□ -0.08
HMGN1-219ENST00000491183 GABRA5P31644 462 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 EFNB2P52799 333 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 RAB40BQ12829 278 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 PLA1AQ53H76 456 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 SPIN3Q5JUX0 258 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 CCBE1Q6UXH8 406 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-219ENST00000491183 OR5D18Q8NGL1 313 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 MALSU1Q96EH3 234 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 MRPL48Q96GC5 212 aaKnown RBP14.55□□□□□ -0.08
HMGN1-219ENST00000491183 GSTK1Q9Y2Q3 226 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 TBL2Q9Y4P3 447 aaKnown RBP14.55□□□□□ -0.08
HMGN1-219ENST00000491183 LINC00312Q9Y6C7 94 aa14.55□□□□□ -0.08
HMGN1-219ENST00000491183 SIRPB1O00241 398 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 EBAG9O00559 213 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 SH2D1BO14796 132 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 MGST3O14880 152 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 MMP23AO75900 390 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 TSPAN15O95858 294 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 OR2H2O95918 312 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 OCM2P0CE71 109 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 OCMP0CE72 109 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-219ENST00000491183 LMO1P25800 156 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 ERP29P30040 261 aaKnown RBP14.54□□□□□ -0.08
HMGN1-219ENST00000491183 DEFA6Q01524 100 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 SSX2Q16385 188 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 PDCD1LG2Q9BQ51 273 aa14.54□□□□□ -0.08
HMGN1-219ENST00000491183 MMP27Q9H306 513 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms