RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 GMFBP60983 142 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 DGUOKQ16854 277 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 AWAT2Q6E213 333 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 C22orf42Q6IC83 251 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 C1QL2Q7Z5L3 287 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 CHST4Q8NCG5 386 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 OR4D6Q8NGJ1 314 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 TMEM186Q96B77 213 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 C1orf147Q96MC9 270 aaPredicted RBP13.17□□□□□ -0.3
TRA2A-208ENST00000490942 CST11Q9H112 138 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 OR51E2Q9H255 320 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 IFT22Q9H7X7 185 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 EXOSC4Q9NPD3 245 aaKnown RBP13.17□□□□□ -0.3
TRA2A-208ENST00000490942 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 OR5V1Q9UGF6 321 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 MAB21L2Q9Y586 359 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 V9GY05 133 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 MALRD1Q5VYJ5 2156 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 ZNF469Q96JG9 3925 aaPredicted RBP13.17□□□□□ -0.3
TRA2A-208ENST00000490942 J3QLI3 93 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 DVL1O14640 695 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 BPNT1O95861 308 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 TGFAP01135 160 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 LIPFP07098 398 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 PRKACAP17612 351 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 HTR2CP28335 458 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 GLIPR1L1Q6UWM5 242 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 OR5T2Q8NGG2 359 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 PPP1R35Q8TAP8 253 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 DACT3Q96B18 629 aaPredicted RBP13.16□□□□□ -0.3
TRA2A-208ENST00000490942 CHCHD6Q9BRQ6 235 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 ELL3Q9HB65 397 aaPredicted RBP13.16□□□□□ -0.3
TRA2A-208ENST00000490942 ING4Q9UNL4 249 aa13.16□□□□□ -0.3
TRA2A-208ENST00000490942 YLPM1P49750 1951 aaKnown RBP13.16□□□□□ -0.3
TRA2A-208ENST00000490942 TRBV23-1A0A0A0MS06 115 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A10PA6NDY2 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A18PA6NE21 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A16PA6NEW6 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A20PA6NIJ5 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A8PA6NJQ4 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A7PA6NKC0 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A22PA8MWA6 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A12PA8MX19 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A5PA8MXJ8 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A23PA8MXZ1 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 K7N7A8 449 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 SH2D1BO14796 132 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 AIREO43918 545 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 ZNF737O75373 536 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 CDRT1O95170 752 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 LY6G6DO95868 133 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 HAND1O96004 215 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A15PP0C7V4 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A13PP0C7W8 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A14PP0C7W9 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM90A24PP0C7X0 464 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 RAB3BP20337 219 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 RPL5P46777 297 aaKnown RBP13.15□□□□□ -0.3
TRA2A-208ENST00000490942 GABRA2P47869 451 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 SEC61A1P61619 476 aaKnown RBP13.15□□□□□ -0.3
TRA2A-208ENST00000490942 MPV17LQ2QL34 196 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 CLEC9AQ6UXN8 241 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 OSR2Q8N2R0 312 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FAM216BQ8N7L0 139 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 OR5D13Q8NGL4 314 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 SNX22Q96L94 193 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 GFI1Q99684 422 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 SLC25A10Q9UBX3 287 aaPredicted RBP13.15□□□□□ -0.3
TRA2A-208ENST00000490942 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 AK6Q9Y3D8 172 aaKnown RBP13.15□□□□□ -0.3
TRA2A-208ENST00000490942 ABCA2Q9BZC7 2435 aa13.15□□□□□ -0.3
TRA2A-208ENST00000490942 TLN2Q9Y4G6 2542 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 A0A0G2JMP0 313 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 A0A0X1KG70 313 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 SHISA3A0PJX4 238 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 IFITM5A6NNB3 132 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 HTR3BO95264 441 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 ZNF16P17020 682 aaPredicted RBP13.14□□□□□ -0.31
TRA2A-208ENST00000490942 ZFP36P26651 326 aaKnown RBP13.14□□□□□ -0.31
TRA2A-208ENST00000490942 PAX2Q02962 417 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 SLC22A6Q4U2R8 563 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 OR4M2Q8NGB6 313 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 RAB40AQ8WXH6 277 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 SLC25A28Q96A46 364 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 CENPOQ9BU64 300 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 FUNDC2Q9BWH2 189 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 PLGRKTQ9HBL7 147 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 SPACA1Q9HBV2 294 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 SCOCQ9UIL1 159 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 KCNS2Q9ULS6 477 aa13.14□□□□□ -0.31
TRA2A-208ENST00000490942 LOC105371242A0A075B767 164 aa13.13□□□□□ -0.31
TRA2A-208ENST00000490942 LOC100506127A0A0U1RQW1 187 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms